Alignment of alleles: Sandbar shark (Carcharhinus plumbeus) IGHJ (overview)

Only one sequence for each allele is shown. This set of sequences is part of the IMGT reference directory.
Other known sequences are shown in the individual  Alignments of alleles.
The W, G and G of the WGXG motif are shown in brown, in the allele *01 amino acid sequence.

                                 F   D   Y   W   G   N   G   T   F   V   E   V   T   S   
  U40560  ,IGHJ1*01             TTT GAT TAT TGG GGG AAT GGA ACC TTC GTG GAA GTG ACT TCA  #c

                                 F   D   F   W   G   S   G   T   F   V   E   V   T   S   
  U50605  ,IGHJ2*01             TTT GAT TTT TGG GGG AGC GGA ACC TTC GTG GAA GTG ACT TCA  #c

                                 F   D   Y   W   G   S   G   T   F   V   E   V   T   S   
  U50604  ,IGHJ3*01             TTT GAT TAC TGG GGG AGC GGA ACC TTC GTG GAA GTG ACT TCA  #c

                                 G   D   Y   W   G   K   G   T   F   V   E   V   T   S    
  U50607  ,IGHJ4*01             GGG GAT TAT TGG GGG AAG GGA ACC TTC GTG GAA GTG ACT TCA  #c
                                 S   R   Y   W   G   S   G   T   F   V   E   V   T   S   
  U50606  ,IGHJ5*01             TCA CGT TAT TGG GGG AGC GGA ACC TTC GTG GAA GTG ACT TCA  #c
                                 F   D   Y   W   G   S   G   T   F   M   E   V   T   S   
  U50608  ,IGHJ6*01             TTT GAT TAT TGG GGG AGC GGA ACC TTC ATG GAA GTG ACT TCA  #c

                                 F   D   Y   W   G   N   G   T   F   V   E   V   T   S   
  U50609  ,IGHJ7*01             TTT GAT TAT TGG GGG AAT GGA ACC TTC GTG GAA GTG ACT TCA  #c
                                 F   D   V   W   G   N   G   T   F   V   E   V   T   S   
  U50610  ,IGHJ8*01             TTT GAT GTC TGG GGG AAT GGA ACC TTC GTG GAA GTG ACT TCA  #c
#c: rearranged cDNA


Last updated: Tuesday, 03-Apr-2012 08:20:21 CEST
Created: 01/07/2002
Author: Dominique Scaviner

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Res., 27:209-212 (1999); doi: 10.1093/nar/27.1.209 Full text Cover; Ruiz, M. et al., Nucleic Acids Res., 28:219-221 (2000); doi: 10.1093/nar/28.1.219 Full text; Lefranc, M.-P., Nucleic Acids Res., 29:207-209 (2001); doi: 10.1093/nar/29.1.207 Full text; Lefranc, M.-P., Nucleic Acids Res., 31:307-310 (2003); doi: 10.1093/nar/gkg085 Full text; Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5:45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33:D593-597 (2005); doi: 10.1093/nar/gki065 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 37:D1006-1012 (2009); doi: 10.1093/nar/gkn838 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 43:D413-422 (2015); doi: 10.1093/nar/gku1056 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

CNRS Université de Montpellier European Commission
IMGT® Founder and Executive Director Emeritus:
Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr
IMGT® Director:
Sofia Kossida Sofia.Kossida@igh.cnrs.fr
Bioinformatics manager:
Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr
Computer manager:
Patrice Duroux Patrice.Duroux@igh.cnrs.fr
Webmaster:
Amélie Houles

Citing IMGT | Warranty disclaimer and copyright notice | Privacy policy and advertisement policy

© Copyright 1995-2017 IMGT®, the international ImMunoGeneTics information system®