Alignment of alleles: Sandbar shark (Carcharhinus plumbeus) IGIV1S2

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps by comparison to the longest sequence. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20 
                                 D   P   V   L   T   Q   P   R   S       I   S   S   S   P   G   K   T   V   T 
  U34992  ,IGIV1S2*01           GAT CCT GTC CTG ACC CAA CCA AGA TCC ... ATT TCG TCC TCA CCG GGA AAG ACC GTC ACC

                                                        ___________________CDR1-IMGT____________________        
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40 
                                 I   T   C   T   M   S   G   G   T   I   S   S   Y   Y                   A   S 
  U34992  ,IGIV1S2*01           ATC ACT TGC ACC ATG TCC GGA GGC ACC ATT AGC AGC TAC TAC ... ... ... ... GCG AGC

                                                                                            _______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60 
                                 W   Y   W   Q   R   P   G   S   A   P   V   L   V   W   S   D   Y   N         
  U34992  ,IGIV1S2*01           TGG TAC TGG CAG AGA CCC GGC AGC GCC CCT GTG CTT GTT TGG TCC GAT TAC AAT ... ...

                                IMGT________________                                                            
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80 
                                                     G   L   A   S   G   I   P       N   R   F   A   G   S   V 
  U34992  ,IGIV1S2*01           ... ... ... ... ... GGT CTG GCT TCG GGT ATT CCG ... AAT CGA TTC GCC GGG TCT GTG

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100 
                                 D   S   S   R   T   K   M   H   L   T   I   T   N   V   Q   S   E   E   A   A 
  U34992  ,IGIV1S2*01           GAC TCA TCA AGA ACG AAG ATG CAT TTA ACG ATC ACC AAC GTG CAA TCG GAG GAA GCT GCA

                                                _________________CDR3-IMGT__________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 
                                 D   Y   S   C   G   A   R   L   S   S   A   V   R   
  U34992  ,IGIV1S2*01           GAT TAT TCC TGT GGT GCT CGG CTC AGC AGT GCA GTT AGA      ~VJ

~VJ: VJ genomic DNA rearranged in the cassette.


This alignment of allele is automatically generated by Mehdi Yousfi alignment of allele tool.


Created: Monday, 11-Jul-2011 12:56:59 CEST
Author: Dominique Scaviner

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