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Alignment of alleles: Common carp (Cyprinus carpio) IGIV2S7

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 V   K   V   V   T   Q   K   P   S   I   L   T   E   Q   K   G   R   S   V   T 
  AB103563,IGIV2S7*01           GTA AAA GTG GTC ACA CAG AAA CCC TCT ATA CTG ACG GAA CAA AAA GGG AGA TCT GTG ACT

                                                        _________________CDR1-IMGT______________________        
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 M   D   C   N   I   E   K   D   D   G   Y   Y                           G   G 
  AB103563,IGIV2S7*01           ATG GAC TGT AAT ATT GAA AAG GAC GAC GGT TAT TAT ... ... ... ... ... ... GGC GGC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   K   Q   I   P   N   A   A   P   Q   F   V   L   R   Y   Y   H   S   H 
  AB103563,IGIV2S7*01           TGG TAT AAA CAG ATC CCA AAT GCA GCT CCT CAG TTT GTG TTG AGA TAC TAT CAT TCT CAC

                                GT__________________                                                            
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 S   S   P   N   K   Y   G   D   G   F   S   S       S   R   F   T   S   N   A 
  AB103563,IGIV2S7*01           AGC TCC CCT AAC AAA TAT GGG GAT GGT TTT TCC TCC ... AGC CGC TTC ACA TCT AAT GCT

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                     Q   S   K   I   D   Y   K   L   I   I   S   N   V   D   V   D   D   S   A 
  AB103563,IGIV2S7*01           ... CAG TCA AAA ATT GAC TAT AAG CTG ATC ATC AGT AAT GTG GAT GTT GAT GAT TCT GCA

                                                _____________CDR3-IMGT__________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 114
                                 V   Y   Y   C   G   T   C   D   S   S   A   S   E   E  
  AB103563,IGIV2S7*01           GTG TAT TAT TGT GGC ACA TGT GAC AGC TCT GCT AGT GAG GAG #c

#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 08/10/2003
Author: Nathalie Bosc
Contact: Marie-Paule Lefranc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.

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