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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                          Y   Y   W   Y   F   D   F   W   G   P   G   T   M   V   T   V   S   S  
  RatNor_6_chr6 IGHJ1*01 F J-REGION gDNA       c tac tac tgg tac ttt gac ttc tgg ggc cca gga acc atg gtc acc gtg tcc tca g
                                                                                                                         
  M13798        IGHJ1*01 F J-REGION gDNA       - --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -
                                                                                                                         
  AABR03049259  IGHJ1*01 F J-REGION gDNA       - --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -

                                                          D   Y   F   D   Y   W   G   Q   G   V   M   V   T   V   S   S  
  RatNor_6_chr6 IGHJ2*01 F J-REGION gDNA               t gac tac ttt gat tac tgg ggc caa gga gtc atg gtc aca gtc tcc tca g
                                                                                                                 
  X56791        IGHJ2*01 F J-REGION gDNA               - --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -
                                                                                                                 
  AABR03049259  IGHJ2*01 F J-REGION gDNA               - --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -


                                                          N   W   F   A   Y   W   G   Q   G   T   L   V   T   V   S   S  
  RatNor_6_chr6 IGHJ3*01 F J-REGION gDNA              ac aat tgg ttt gct tac tgg ggc caa ggc act ctg gtc act gtc tct tca g
                                                                                                                 
  X56791        IGHJ3*01 F J-REGION gDNA              -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -
                                                                                                                 
  AABR03049259  IGHJ3*01 F J-REGION gDNA              -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -

                                                      Y   Y   V   M   D   A   W   G   Q   G   A   S   V   T   V   S   S  
  RatNor_6_chr6 IGHJ4*01 F J-REGION gDNA          at tac tat gtt atg gat gcc tgg ggt caa gga gct tca gtc act gtc tcc tca g
                                                                                                                     
  X56791        IGHJ4*01 F J-REGION gDNA          -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -
                                                                                                                     
  AABR03049259  IGHJ4*01 F J-REGION gDNA          -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
11/02/2016
Last updated:
23/02/2016
Authors:
Mélanie Arrivet