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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                
                                                 1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                 Q   V   K   L   L   Q   S   G   A       A   L   V   K   P   G   A   S   V   K 
  RatNor_3_chr6 IGHV1-36*01 F V-REGION gDNA     cag gtc aag ctg ctg cag tct ggg gct ... gca ctg gtg aag cct gga gcc tct gtg aag
                                                                                                                               
  AABR03049163  IGHV1-36*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                        _____________________CDR1-IMGT______________________    
                                                
                                                 21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                 M   S   C   K   A   S   G   Y   T   F                       T   D   Y   W   V 
  RatNor_3_chr6 IGHV1-36*01 F V-REGION gDNA     atg tct tgc aaa gct tct ggt tat aca ttc ... ... ... ... ... act gac tac tgg gtg
                                                                                                                               
  AABR03049163  IGHV1-36*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                _______________C
                                                
                                                 40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                 S   W   V   K   Q   S   H   G   K   S   L   E   W   I   G   E   I   Y   P   N 
  RatNor_3_chr6 IGHV1-36*01 F V-REGION gDNA     agc tgg gtg aag cag agt cat gga aag agc ctt gag tgg att ggg gaa att tat cct aac
                                                                                                                               
  AABR03049163  IGHV1-36*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                DR2-IMGT________________                                                        
                                                
                                                 60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                         S   G   A   T   N   F   N   E   K   F   K       G   K   A   T   L   T 
  RatNor_3_chr6 IGHV1-36*01 F V-REGION gDNA     ... ... agt ggt gct act aac ttc aat gaa aag ttc aag ... ggc aag gcc aca ttg act
                                                                                                                               
  AABR03049163  IGHV1-36*01 F V-REGION gDNA     ... ... --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                
                                                
                                                 80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                 V   D   K   S   T   S   T   A   Y   M   E   L   S   R   L   T   S   E   D   S 
  RatNor_3_chr6 IGHV1-36*01 F V-REGION gDNA     gta gac aaa tcc acc agc aca gcc tat atg gag ctc agc aga ttg aca tct gag gac tct
                                                                                                                               
  AABR03049163  IGHV1-36*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                        CDR3-IMG
                                                
                                                100 101 102 102A103 104 105 106 
                                                 A   I   Y       Y   C   T   R  
  RatNor_3_chr6 IGHV1-36*01 F V-REGION gDNA     gca atc tat ... tac tgt aca aga 
                                                                                
  AABR03049163  IGHV1-36*01 F V-REGION gDNA     --- --- --- ... --- --- --- --- 


This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
04/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet