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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                  
                                                   1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                   E   V   K   L   Q   Q   S   G   D       E   L   V   R   P   G   A   S   V   K 
  RatNor_3_chr6 IGHV1-56*01 ORF V-REGION gDNA     gag gta aag ctg caa cag tct gga gat ... gag ttg gtg agg cct ggg gct tca gtg aag
                                                                                                                                 
  AABR03054088  IGHV1-56*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                          _____________________CDR1-IMGT______________________    
                                                  
                                                   21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                   I   S   C   K   A   S   G   Y   T   F                       T   S   Y   S   M 
  RatNor_3_chr6 IGHV1-56*01 ORF V-REGION gDNA     ata tcc tgt aag gct tct ggg tac act ttc ... ... ... ... ... acc agc tat tct atg
                                                                                                                                 
  AABR03054088  IGHV1-56*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                  _______________C
                                                  
                                                   40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                   H   W   V   K   Q   R   P   G   Q   G   L   E   W   I   G   A   I   I   P   I 
  RatNor_3_chr6 IGHV1-56*01 ORF V-REGION gDNA     cac tgg gta aag cag agg cct gga cag ggc ctg gaa tgg att gga gct att att cct ata
                                                                                                                                 
  AABR03054088  IGHV1-56*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                  DR2-IMGT________________                                                        
                                                  
                                                   60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                           I   D   T   T   E   Y   N   Q   K   F   K       G   K   A   T   L   T 
  RatNor_3_chr6 IGHV1-56*01 ORF V-REGION gDNA     ... ... att gat act act gaa tat aat cag aag ttt aag ... ggc aag gcg aca ctg act
                                                                                                                                 
  AABR03054088  IGHV1-56*01 ORF V-REGION gDNA     ... ... --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                  
                                                  
                                                   80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                   A   D   K   S   S   N   T   A   N   M   E   L   S   R   L   T   S   E   D   S 
  RatNor_3_chr6 IGHV1-56*01 ORF V-REGION gDNA     gca gac aaa tcc tcc aac aca gcc aac atg gaa ctc agc aga ttg aca tct gag gac tct
                                                                                                                                 
  AABR03054088  IGHV1-56*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                          CDR3-IMG
                                                  
                                                  100 101 102 102A103 104 105 106 
                                                   A   V   Y       Y   C   A   R  
  RatNor_3_chr6 IGHV1-56*01 ORF V-REGION gDNA     gcg gtc tat ... tac tgt gca aga 
                                                                                  
  AABR03054088  IGHV1-56*01 ORF V-REGION gDNA     --- --- --- ... --- --- --- --- 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
04/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet