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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                  
                                                   1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                   Q   V   Q   L   Q   Q   S   G   A       E   L   V   K   P   G   S   S   V   K 
  RatNor_3_chr6 IGHV1-68*01 ORF V-REGION gDNA     cag gtc cag ttg cag cag tct gga gct ... gag ctg gtg aag cct ggg tct tcg gtg aaa
                                                                                                                                 
  AABR03051642  IGHV1-68*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                          _____________________CDR1-IMGT______________________    
                                                  
                                                   21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                   L   S   C   K   A   S   G   Y   T   F                       T   E   Y   D   I 
  RatNor_3_chr6 IGHV1-68*01 ORF V-REGION gDNA     ctg tcc tgc aag gct tct ggc tac acc ttc ... ... ... ... ... act gaa tat gat att
                                                                                                                                 
  AABR03051642  IGHV1-68*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                  _______________C
                                                  
                                                   40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                   D   W   V   K   Q   R   P   G   Q   G   L   E   W   I   G   G   I   N   T   E 
  RatNor_3_chr6 IGHV1-68*01 ORF V-REGION gDNA     gac tgg gta aag cag agg cct gga cag ggc ctg gaa tgg att gga ggt att aat acg gaa
                                                                                                                                 
  AABR03051642  IGHV1-68*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                  DR2-IMGT________________                                                        
                                                  
                                                   60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                           N   G   D   T   D   Y   N   E   K   F   K       G   R   A   T   L   T 
  RatNor_3_chr6 IGHV1-68*01 ORF V-REGION gDNA     ... ... aat ggt gat act gac tac aat gag aag ttt aaa ... ggc agg gcc aca ctg act
                                                                                                                                 
  AABR03051642  IGHV1-68*01 ORF V-REGION gDNA     ... ... --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                  
                                                  
                                                   80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                   A   D   T   S   S   N   T   A   Y   M   E   L   S   R   L   T   S   E   D   S 
  RatNor_3_chr6 IGHV1-68*01 ORF V-REGION gDNA     gca gac aca tcc tcc aac aca gcc tac atg gaa ctc agc aga ttg aca tct gag gac tct
                                                                                                                                 
  AABR03051642  IGHV1-68*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                          CDR3
                                                  
                                                  100 101 102 102A103 104 
                                                   A   V   Y       N   C  
  RatNor_3_chr6 IGHV1-68*01 ORF V-REGION gDNA     gca gtc tat ... aac tgt g
                                                                          
  AABR03051642  IGHV1-68*01 ORF V-REGION gDNA     --- --- --- ... --- --- -

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
04/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet