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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                 
                                                  1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                  K   V   Q   V   V   E   S   G   G       G   L   V   Q   P   K   G   S   L   K 
  RatNor_3_chr6 IGHV10-14*01 P V-REGION gDNA     aag gta cag gtt gtt gag tct ggt gga ... gga ttg gtg cag cct aaa ggg tca ctg aaa
                                                                                                                                
  AABR03048505  IGHV10-14*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                         _____________________CDR1-IMGT______________________    
                                                 
                                                  21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                  I   *   C   A   A   S   G   F   T   F                       N   M   F   V   M 
  RatNor_3_chr6 IGHV10-14*01 P V-REGION gDNA     atc taa tgt gca gcc tct gga ttc acc ttc ... ... ... ... ... aat atg ttt gtc atg
                                                                                                                                
  AABR03048505  IGHV10-14*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                 _______________C
                                                 
                                                  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                  Y   W   V   C   Q   A   P   G   K   C   L   E   W   V   A   C   I   R   S   K 
  RatNor_3_chr6 IGHV10-14*01 P V-REGION gDNA     tac tgg gtc tgc cag gct cca gga aag tgc ctg gaa tgg gtt gct tgc ata aga agt aaa
                                                                                                                                
  AABR03048505  IGHV10-14*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                 DR2-IMGT________________                                                        
                                                 
                                                  60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                  S   N   N   Y   V   T   Y   Y   A   D   S   V   *       D   Q   I   T   I   S 
  RatNor_3_chr6 IGHV10-14*01 P V-REGION gDNA     agt aat aat tat gta aca tat tat gct gat tca gtg taa ... gac caa atc acc atc tcc
                                                                                                                                
  AABR03048505  IGHV10-14*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                 
                                                 
                                                  80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                  R   D   D   S   Q   S   K   V   Y   L   Q   M   N   N   L   K   T   E   G   T 
  RatNor_3_chr6 IGHV10-14*01 P V-REGION gDNA     aga gat gat tca caa agc aag gtc tac ctg caa atg aac aac ctg aaa act gag gga aca
                                                                                                                                
  AABR03048505  IGHV10-14*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                         _CDR3-IMGT__
                                                 
                                                 100 101 102 102A103 104 105 106 
                                                  A   M   Y       Y   C   T   K  
  RatNor_3_chr6 IGHV10-14*01 P V-REGION gDNA     gcc atg tat ... tac tgt aca aag tg
                                                                                 
  AABR03048505  IGHV10-14*01 P V-REGION gDNA     --- --- --- ... --- --- --- --- --

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet