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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                
                                                 1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                 E   V   Q   L   K   *   I   G   P       D   L   L   H   T   S   Q   T   L   S 
  RatNor_1_chr6 IGHV2-35*01 P V-REGION gDNA     gag gta caa ctg aag tag ata gga cct ... gac ctg ctg cat acc tca cag acc ctg tct
                                                                                                                               
  AABR03048499  IGHV2-35*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                        _____________________CDR1-IMGT______________________    
                                                
                                                 21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                 L   N   C   P   I   S   D   L   S   L                       T   I   H   G   V 
  RatNor_1_chr6 IGHV2-35*01 P V-REGION gDNA     ctc aac tgt cct atc tct gac ttg tca tta ... ... ... ... ... acc atc cat ggt gta
                                                                                                                               
  AABR03048499  IGHV2-35*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                _______________C
                                                
                                                 40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                 N   W   V   L   Q   S   L   G   K   G   L   Q   W   I   L   A   M   *   S   N 
  RatNor_1_chr6 IGHV2-35*01 P V-REGION gDNA     aac tgg gtc ctt cag tct cta gga aag ggt ctg cag tgg ata cta gca atg taa agt aat
                                                                                                                               
  AABR03048499  IGHV2-35*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                DR2-IMGT________________                                                        
                                                
                                                 60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                             E   I   T   L   Y   N   S   D   L   K       F   *   V   S   I   R 
  RatNor_1_chr6 IGHV2-35*01 P V-REGION gDNA     ... ... ... gaa atc aca ttg tat aat tca gat ctc aaa ... ttc taa gtt agc atc agg
                                                                                                                               
  AABR03048499  IGHV2-35*01 P V-REGION gDNA     ... ... ... --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                
                                                
                                                 80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                 R   D   T   L   N   S   K   V   F   L   K   L   N   K   V   Q   T   L   D   T 
  RatNor_1_chr6 IGHV2-35*01 P V-REGION gDNA     agg gat aca ttg aac agt aaa gtt ttc ttg aaa ctg aac aaa gtt caa act ttg gac aca
                                                                                                                               
  AABR03048499  IGHV2-35*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                        _CDR3-IMGT__
                                                
                                                100 101 102 102A103 104 105 106 
                                                 T   I   Y       F   C   A   R  
  RatNor_1_chr6 IGHV2-35*01 P V-REGION gDNA     acc atc tac ... ttt tgt gcc aga ga
                                                                                
  AABR03048499  IGHV2-35*01 P V-REGION gDNA     --- --- --- ... --- --- --- --- --

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
05/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet