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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                
                                                 1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                 E   I   Q   L   K   *   S   V   P       D   L   L   H   P   S   Q   S   L   S 
  RatNor_1_chr6 IGHV2-44*01 P V-REGION gDNA     gag att caa ctg aag tag tca gta ccc ... gac ctg cta cat ccc tca cag agc ttg tct
                                                                                                                               
  AABR03048730  IGHV2-44*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                        _____________________CDR1-IMGT______________________    
                                                
                                                 21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                 L   N   C   P   I   S   D   F   S   L                       T   I   K   D   V 
  RatNor_1_chr6 IGHV2-44*01 P V-REGION gDNA     ctc aac tgc cct atc tct gac ttc tca tta ... ... ... ... ... acc atc aaa gat gta
                                                                                                                               
  AABR03048730  IGHV2-44*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                _______________C
                                                
                                                 40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                 N   W   A   L   Q   P   L   G   K   G   L   Q   W   M   L   S   M   *   S   N 
  RatNor_1_chr6 IGHV2-44*01 P V-REGION gDNA     aac tgg gcc ctc cag ccc cta gga aag ggt ctg cag tgg atg cta tca atg tga agt aat
                                                                                                                               
  AABR03048730  IGHV2-44*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                DR2-IMGT________________                                                        
                                                
                                                 60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                             E   I   T   L   Y   D   S   H   L   K       S   *   I   S   I   S 
  RatNor_1_chr6 IGHV2-44*01 P V-REGION gDNA     ... ... ... gaa atc aca tta tat gat tca cat ctc aaa ... tcc tga atc agc atc agc
                                                                                                                               
  AABR03048730  IGHV2-44*01 P V-REGION gDNA     ... ... ... --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                
                                                
                                                 80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                 G   D   T   S   K   S   Q   V   F   L   K   L   N   *   V   *   T   *   D   T 
  RatNor_1_chr6 IGHV2-44*01 P V-REGION gDNA     ggg gac aca tcc aag agt caa gtt ttc tta aaa ctg aat taa gtt taa act tag gac aca
                                                                                                                               
  AABR03048730  IGHV2-44*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                        _CDR3-IMGT__
                                                
                                                100 101 102 102A103 104 105 106 
                                                 A   N   Y       L   F   A   R  
  RatNor_1_chr6 IGHV2-44*01 P V-REGION gDNA     gcc aac tat ... ctc ttt gcc aga ga
                                                                                
  AABR03048730  IGHV2-44*01 P V-REGION gDNA     --- --- --- ... --- --- --- --- --

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
05/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet