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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                  
                                                   1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                   Q   V   Q   L   K   E   S   G   P       G   L   L   L   S   S   E   T   L   S 
  RatNor_1_chr6 IGHV2-59*01 ORF V-REGION gDNA     cag gtg cag ctc aag gag tca gga cct ... ggt ctg ctg ctg tcc tca gag acc ctg tct
                                                                                                                                 
  AABR03052056  IGHV2-59*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                          _____________________CDR1-IMGT______________________    
                                                  
                                                   21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                   L   T   C   T   V   S   G   F   S   L                       T   S   Y   D   V 
  RatNor_1_chr6 IGHV2-59*01 ORF V-REGION gDNA     ctc acc tgc act gtc tct ggg ttc tca cta ... ... ... ... ... aca agc tat gat gta
                                                                                                                                 
  AABR03052056  IGHV2-59*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                  _______________C
                                                  
                                                   40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                   S   W   V   R   Q   L   P   G   K   G   L   E   W   M   G   G   V   W   I   G 
  RatNor_1_chr6 IGHV2-59*01 ORF V-REGION gDNA     agc tgg gtt cga cag ctt cca gga aaa ggg ctg gag tgg atg gga ggg gta tgg att ggt
                                                                                                                                 
  AABR03052056  IGHV2-59*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                  DR2-IMGT________________                                                        
                                                  
                                                   60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                               G   N   T   E   Y   N   S   D   L   K       S   R   L   S   I   S 
  RatNor_1_chr6 IGHV2-59*01 ORF V-REGION gDNA     ... ... ... gga aac aca gag tat aat tca gat ctc aaa ... tcc cga ctg agc atc agc
                                                                                                                                 
  AABR03052056  IGHV2-59*01 ORF V-REGION gDNA     ... ... ... --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                  
                                                  
                                                   80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                   R   D   T   S   K   S   Q   V   F   L   K   M   S   N   L   K   T   E   D   T 
  RatNor_1_chr6 IGHV2-59*01 ORF V-REGION gDNA     agg gac acc tcc aag agc caa gtt ttc tta aaa atg agc aat ctg aaa act gaa gac acg
                                                                                                                                 
  AABR03052056  IGHV2-59*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                          _CDR3-IMGT__
                                                  
                                                  100 101 102 102A103 104 105 106 
                                                   G   T   Y       Y   C   A   R  
  RatNor_1_chr6 IGHV2-59*01 ORF V-REGION gDNA     ggc act tac ... tac tgt gcc aga ga
                                                                                  
  AABR03052056  IGHV2-59*01 ORF V-REGION gDNA     --- --- --- ... --- --- --- --- --

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
05/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet