When several alleles are shown, the nucleotide mutations and amino acid
changes for a given codon are indicated in red letters. These polymorphic mutations are reported in
Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the
IMGT unique numbering.
Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 R V K L Q E S * P G F V K S S Q S L S RatNor_2_chr6 IGHV3-2*01 P V-REGION gDNA cgg gtg aag ctt cag gaa tca tga cct ... ggc ttt gta aaa tcc tct cag tca ctg tcc AABR03051045 IGHV3-2*01 P V-REGION gDNA --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- --- _____________________CDR1-IMGT______________________ 21 22 23 24 25 26 27 28 29 30 31 32 32.1 33 34 35 36 37 38 39 L T C S V I G Y S I T T A Y D Y W RatNor_2_chr6 IGHV3-2*01 P V-REGION gDNA ctc acc tgt tct gtt att gga tac tcc atc acc ... ... ... act gct tat gat tac tgg AABR03051045 IGHV3-2*01 P V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- ... ... ... --- --- --- --- --- --- _______________C 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 S W I Q K F P G N K L E W M G Y I S Y D RatNor_2_chr6 IGHV3-2*01 P V-REGION gDNA agc tgg atc cag aaa ttc cca gga aat aaa ttg gaa tgg atg gga tac ata agc tat gat AABR03051045 IGHV3-2*01 P V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DR2-IMGT________________ 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 G S I N Y N P S L K S * I S I T RatNor_2_chr6 IGHV3-2*01 P V-REGION gDNA ... ... ... ggc agc att aat tac aac cca tct ctc aaa ... agt tga atc tcc atc act AABR03051045 IGHV3-2*01 P V-REGION gDNA ... ... ... --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 R D T S K N Q F F L Q L N T V T T E D T RatNor_2_chr6 IGHV3-2*01 P V-REGION gDNA aga gac aca tcg aag aac caa ttc ttc ctg cag ttg aac act gtg aca act gag gac acg AABR03051045 IGHV3-2*01 P V-REGION gDNA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- _CDR3-IMGT__ 100 101 102 102A103 104 105 106 A V Y Y C A R RatNor_2_chr6 IGHV3-2*01 P V-REGION gDNA gcc gtg tat ... tac tgt gcg aga ca AABR03051045 IGHV3-2*01 P V-REGION gDNA --- --- --- ... --- --- --- --- --
This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux, Mehdi Yousfi and Perrine Pégorier).
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as
"IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Res., 27:209-212 (1999); doi: 10.1093/nar/27.1.209
Full text
Cover;
Ruiz, M. et al.,
Nucleic Acids Res., 28:219-221 (2000); doi: 10.1093/nar/28.1.219
Full text;
Lefranc, M.-P.,
Nucleic Acids Res., 29:207-209 (2001); doi: 10.1093/nar/29.1.207
Full text;
Lefranc, M.-P.,
Nucleic Acids Res., 31:307-310 (2003); doi: 10.1093/nar/gkg085
Full text;
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub], 5:45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33:D593-597 (2005); doi: 10.1093/nar/gki065
Full text;
Lefranc, M.-P. et al.,
Nucleic Acids Res., 37:D1006-1012 (2009); doi: 10.1093/nar/gkn838
Full text;
Lefranc, M.-P. et al.,
Nucleic Acids Res., 43:D413-422 (2015); doi: 10.1093/nar/gku1056
Full text.
For any other use please contact Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr.
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