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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                               
                                                1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                E   V   Q   I   Q   E   S   G   P       G   L   V   K   P   S   Q   S   L   S 
  RatNor_2_chr6 IGHV3-7*01 F V-REGION gDNA     gag gtg cag att cag gag tca gga cct ... ggc ctt gtg aaa ccc tca cag tca ctc tcc
                                                                                                                              
  AABR03050396  IGHV3-7*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                       _____________________CDR1-IMGT______________________    
                                               
                                                21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                L   T   C   S   V   T   G   Y   S   I   T                   S   R   N   Y   W 
  RatNor_2_chr6 IGHV3-7*01 F V-REGION gDNA     ctc acc tgt tct gtt act ggt tac tcc att acc ... ... ... ... agt cgt aat tac tgg
                                                                                                                              
  AABR03050396  IGHV3-7*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- ---


                                                                                                               _______________C
                                               
                                                40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                S   W   I   Q   K   F   P   G   N   K   M   E   C   M   G   H   I   T   D   N 
  RatNor_2_chr6 IGHV3-7*01 F V-REGION gDNA     agc tgg atc cag aag ttc cca gga aat aaa atg gag tgt atg gga cac ata acc gac aat
                                                                                                                              
  AABR03050396  IGHV3-7*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                               DR2-IMGT________________                                                        
                                               
                                                60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                            G   S   A   N   Y   N   P   S   L   K       S   R   I   S   I   T 
  RatNor_2_chr6 IGHV3-7*01 F V-REGION gDNA     ... ... ... ggt agc gct aac tac aac cca tct ctc aaa ... agt cga atc tcc att act
                                                                                                                              
  AABR03050396  IGHV3-7*01 F V-REGION gDNA     ... ... ... --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                               
                                               
                                                80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                R   D   T   S   K   N   Q   F   F   L   Q   L   N   S   V   T   T   E   D   T 
  RatNor_2_chr6 IGHV3-7*01 F V-REGION gDNA     aga gac acc tcc aag aat cag ttc ttt ctg cag tta aac tct gta act act gag gat aca
                                                                                                                              
  AABR03050396  IGHV3-7*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                       _CDR3-IMGT__
                                               
                                               100 101 102 102A103 104 105 106 
                                                D   T   Y       Y   C   A   G  
  RatNor_2_chr6 IGHV3-7*01 F V-REGION gDNA     gac aca tac ... tac tgt gca gga ca
                                                                               
  AABR03050396  IGHV3-7*01 F V-REGION gDNA     --- --- --- ... --- --- --- --- --

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet