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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                 
                                                  1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                  Q   M   Q   L   Q   E   S   G   P       G   L   V   K   P   T   Q   S   L   F 
  RatNor_2_chr6 IGHV3-8*01 ORF V-REGION gDNA     cag atg cag cta caa gaa tca gga cct ... ggc ctg gtg aaa ccc acc cag tca ctc ttc
                                                                                                                                
  AABR03048797  IGHV3-8*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                         _____________________CDR1-IMGT______________________    
                                                 
                                                  21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                  L   T   C   S   V   T   G   F   S   I   T                   S   G   Y   Y   W 
  RatNor_2_chr6 IGHV3-8*01 ORF V-REGION gDNA     ctc acc tgc tct gtc act ggt ttt tcc atc acc ... ... ... ... agt ggt tat tac tgg
                                                                                                                                
  AABR03048797  IGHV3-8*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- ---


                                                                                                                 _______________C
                                                 
                                                  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                  I   W   I   R   Q   S   H   G   K   H   L   E   W   M   G   Y   M   T   Y   S 
  RatNor_2_chr6 IGHV3-8*01 ORF V-REGION gDNA     atc tgg atc cgg cag tca cat ggg aaa cac cta gaa tgg atg ggg tac atg act tac agc
                                                                                                                                
  AABR03048797  IGHV3-8*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                 DR2-IMGT________________                                                        
                                                 
                                                  60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                              G   E   T   F   Y   N   P   S   L   K       S   P   I   S   I   T 
  RatNor_2_chr6 IGHV3-8*01 ORF V-REGION gDNA     ... ... ... ggg gaa act ttc tac aac cca tcc ctc aag ... agc cca atc tcc att act
                                                                                                                                
  AABR03048797  IGHV3-8*01 ORF V-REGION gDNA     ... ... ... --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                 
                                                 
                                                  80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                  R   E   T   S   K   N   Q   F   F   L   Q   L   N   S   V   T   T   E   D   T 
  RatNor_2_chr6 IGHV3-8*01 ORF V-REGION gDNA     aga gaa aca tcc aag aac cag ttt ttc ctg caa ttg aac tct gtg acc aca gag gac aca
                                                                                                                                
  AABR03048797  IGHV3-8*01 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                         _CDR3-IMGT__
                                                 
                                                 100 101 102 102A103 104 105 106 
                                                  A   M   Y       Y   C   A   G  
  RatNor_2_chr6 IGHV3-8*01 ORF V-REGION gDNA     gcc atg tat ... tac tgt gca gga ga
                                                                                 
  AABR03048797  IGHV3-8*01 ORF V-REGION gDNA     --- --- --- ... --- --- --- --- --

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet