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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                
                                                 1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                 E   V   Q   L   V   E   S   G   E       G   L   V   Q   T   *   S   S   L   K 
  RatNor_1_chr6 IGHV5-16*01 P V-REGION gDNA     gag gtg cag ctg gta gag tcc ggt gaa ... ggc tta gta cag act tga agt tcc ctg aaa


                                                                        _____________________CDR1-IMGT______________________    
                                                
                                                 21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                 L   S   C   V   A   S   G   F   T   F                       N   K   Y   D   M 
  RatNor_1_chr6 IGHV5-16*01 P V-REGION gDNA     ctc tcc tgt gta gcc tcg gga ttc act ttc ... ... ... ... ... aat aag tat gac atg


                                                                                                                _______________C
                                                
                                                 40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                 R   W   V   H   Q   A   P   K   K   G   L   E   L   V   A   I   I   Y   Y   G 
  RatNor_1_chr6 IGHV5-16*01 P V-REGION gDNA     cgc tgg gtt cac cag gct cca aag aag ggt ctg gaa ttg gtt gca atc att tat tat ggt


                                                DR2-IMGT________________                                                        
                                                
                                                 60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                         G   D   N   K   Y   Y   A   D   T   V   K       G   Q   F   T   I   S 
  RatNor_1_chr6 IGHV5-16*01 P V-REGION gDNA     ... ... ggt gat aac aag tac tat gca gac aca gtg aag ... ggt caa ttc acc atc tcc


                                                                                                                                
                                                
                                                 80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                 R   K   N   S   K   K   T   L   S   L   E   K   S   S   L   R   S   E   D   T 
  RatNor_1_chr6 IGHV5-16*01 P V-REGION gDNA     aga aag aat tct aag aaa acc ctg tcc ctg gaa aag agc agt ctg agg tct gag gac aca


                                                                        CDR3-IMG
                                                
                                                100 101 102 102A103 104 105 106 
                                                 A   M   Y       Y   C   A   K  
  RatNor_1_chr6 IGHV5-16*01 P V-REGION gDNA     gcc atg tat ... tat tgt gca aaa 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet