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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                
                                                 1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                 E   V   Q   L   V   E   S   G   G       G   L   V   Q   P   G   R   S   M   K 
  RatNor_1_chr6 IGHV5-25*01 F V-REGION gDNA     gag gtg cag ctg gtg gag tct ggg gga ... ggc tta gtg cag cct gga agg tcc atg aaa


                                                                        _____________________CDR1-IMGT______________________    
                                                
                                                 21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                 L   S   C   A   A   S   G   F   T   F                       S   N   Y   Y   M 
  RatNor_1_chr6 IGHV5-25*01 F V-REGION gDNA     ctc tcc tgt gca gcc tca gga ttc act ttc ... ... ... ... ... agt aac tat tac atg


                                                                                                                _______________C
                                                
                                                 40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                 A   W   V   R   Q   A   P   T   K   G   L   E   W   V   A   S   I   S   T   G 
  RatNor_1_chr6 IGHV5-25*01 F V-REGION gDNA     gcc tgg gtc cgc cag gct cca acg aag ggt ctg gag tgg gtc gca tcc att agt act ggt


                                                DR2-IMGT________________                                                        
                                                
                                                 60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                         G   G   N   T   Y   Y   R   D   S   V   K       G   R   F   T   I   S 
  RatNor_1_chr6 IGHV5-25*01 F V-REGION gDNA     ... ... ggt ggt aac act tac tat cga gac tcc gtg aag ... ggc cga ttc act atc tcc


                                                                                                                                
                                                
                                                 80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                 R   D   N   A   K   S   T   L   Y   L   Q   M   D   S   L   R   S   E   D   T 
  RatNor_1_chr6 IGHV5-25*01 F V-REGION gDNA     aga gat aat gca aaa agc acc cta tac ctg caa atg gac agt ctg agg tct gag gac acg


                                                                        _CDR3-IMGT__
                                                
                                                100 101 102 102A103 104 105 106 
                                                 A   T   Y       Y   C   A   R  
  RatNor_1_chr6 IGHV5-25*01 F V-REGION gDNA     gcc act tat ... tac tgt gca aga ca

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet