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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                               
                                                1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                E   V   K   L   V   E   T   G   R       G   L   V   *   P   R   G   A   F   K 
  RatNor_1_chr6 IGHV6-1*01 P V-REGION gDNA     gag gtg aag ctg gta gag act ggg aga ... ggt ttg gtg taa ccc agg gga gcc ttc aaa
                                                                                                                              
  AABR03048851  IGHV6-1*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                       _____________________CDR1-IMGT______________________    
                                               
                                                21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                L   S   W   E   A   P   G   F   T   I                       S   D   Y   W   M 
  RatNor_1_chr6 IGHV6-1*01 P V-REGION gDNA     ctc tcc tgg gaa gcc cct gga ttc act atc ... ... ... ... ... agt gac tac tgg atg
                                                                                                                              
  AABR03048851  IGHV6-1*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                               _______________C
                                               
                                                40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                Q   W   V   C   Q   T   P   E   K   G   L   E   W   V   T   E   I   R   T   K 
  RatNor_1_chr6 IGHV6-1*01 P V-REGION gDNA     caa tgg gtc tgc cag act cca gag aag ggg cta gaa tgg gta act gaa att aga acc aaa
                                                                                                                              
  AABR03048851  IGHV6-1*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                               DR2-IMGT________________                                                        
                                               
                                                60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                T   H   N   Y   E   T   Y   Y   A   E   S   V   T       A   R   F   T   P   S 
  RatNor_1_chr6 IGHV6-1*01 P V-REGION gDNA     act cat aat tat gaa aca tac tat gca gag tct gtg aca ... gcc aga ttc acc cca tca
                                                                                                                              
  AABR03048851  IGHV6-1*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                               
                                               
                                                80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                R   D   D   Y   K   S   S   I   Y   L   Q   M   N   I   Q   S   *   R   H   W 
  RatNor_1_chr6 IGHV6-1*01 P V-REGION gDNA     aga gat gat tac aaa agc agc att tac cta caa atg aac att cag agc tga aga cac tgg
                                                                                                                              
  AABR03048851  IGHV6-1*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                       CDR3-IMG
                                               
                                               100 101 102 102A103 104 105 106 
                                                Q   L   L       L   C   K   T  
  RatNor_1_chr6 IGHV6-1*01 P V-REGION gDNA     caa tta tta ... ctg tgc aag aca 
                                                                               
  AABR03048851  IGHV6-1*01 P V-REGION gDNA     --- --- --- ... --- --- --- --- 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet