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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                
                                                 1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                 E   V   K   L   E   E   S   G   G       G   L   V   Q   P   G   V   S   L   K 
  RatNor_2_chr6 IGHV6-19*01 F V-REGION gDNA     gag gtg aaa ctg gag gaa tct ggg gga ... ggt ttg gtg caa cct gga gtg tcc ctg aaa
                                                                                                                               
  AABR03049107  IGHV6-19*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                        _____________________CDR1-IMGT______________________    
                                                
                                                 21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                 L   S   C   A   T   S   G   F   T   F                       S   N   Y   W   M 
  RatNor_2_chr6 IGHV6-19*01 F V-REGION gDNA     ctc tct tgt gca acc tct gga ttc act ttc ... ... ... ... ... agt aac tac tgg atg
                                                                                                                               
  AABR03049107  IGHV6-19*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                                _______________C
                                                
                                                 40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                 E   W   V   R   Q   S   P   G   K   G   L   E   W   V   A   E   I   R   T   K 
  RatNor_2_chr6 IGHV6-19*01 F V-REGION gDNA     gaa tgg gtt cga cag tct cca ggg aag ggg tta gaa tgg gta gcc gaa att aga acc aaa
                                                                                                                               
  AABR03049107  IGHV6-19*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                DR2-IMGT________________                                                        
                                                
                                                 60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                 A   N   N   Y   A   T   Y   Y   G   E   S   M   K       G   R   F   T   I   S 
  RatNor_2_chr6 IGHV6-19*01 F V-REGION gDNA     gct aat aat tat gca aca tac tat ggg gag tct atg aaa ... ggc aga ttc acc atc tca
                                                                                                                               
  AABR03049107  IGHV6-19*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                
                                                
                                                 80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                 R   D   D   S   K   S   M   V   Y   L   Q   M   N   S   I   R   S   E   D   T 
  RatNor_2_chr6 IGHV6-19*01 F V-REGION gDNA     aga gat gat tcc aaa agt atg gtc tac ctg caa atg aac agc ata aga tct gaa gat act
                                                                                                                               
  AABR03049107  IGHV6-19*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                        CDR3-IMG
                                                
                                                100 101 102 102A103 104 105 106 
                                                 G   I   Y       Y   C   T   R  
  RatNor_2_chr6 IGHV6-19*01 F V-REGION gDNA     ggc att tat ... tac tgt aca agg 
                                                                                
  AABR03049107  IGHV6-19*01 F V-REGION gDNA     --- --- --- ... --- --- --- --- 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet