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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                               
                                                1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                E   V   K   L   L   E   S   G   G       G   L   V   Q   S   G   A   S   L   R 
  RatNor_1_chr6 IGHV7-2*01 F V-REGION gDNA     gag gtg aag ctg ttg gaa tct gga gga ... ggt ttg gtg cag tct ggg gct tcc ctc aga
                                                                                                                              
  AABR03050896  IGHV7-2*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                       _____________________CDR1-IMGT______________________    
                                               
                                                21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                L   S   C   V   A   S   G   F   T   F                       S   D   F   F   M 
  RatNor_1_chr6 IGHV7-2*01 F V-REGION gDNA     ctc tcc tgt gta gct tct gga ttc acc ttt ... ... ... ... ... agt gat ttc ttc atg
                                                                                                                              
  AABR03050896  IGHV7-2*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                               _______________C
                                               
                                                40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                D   W   V   R   Q   A   P   G   K   G   L   E   W   I   A   A   S   R   N   K 
  RatNor_1_chr6 IGHV7-2*01 F V-REGION gDNA     gac tgg gtc cga cag gct cca ggg aaa gga ctg gag tgg att gca gca agt aga aac aaa
                                                                                                                              
  AABR03050896  IGHV7-2*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                               DR2-IMGT________________                                                        
                                               
                                                60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                A   R   D   Y   S   A   V   Y   S   A   S   V   N       G   R   F   T   I   S 
  RatNor_1_chr6 IGHV7-2*01 F V-REGION gDNA     gct agg gat tat tca gca gtg tac agt gca tcc gtg aat ... gga agg ttc acc atc tca
                                                                                                                              
  AABR03050896  IGHV7-2*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                               
                                               
                                                80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                R   D   I   S   Q   S   I   L   Y   L   Q   M   N   T   L   K   A   E   D   T 
  RatNor_1_chr6 IGHV7-2*01 F V-REGION gDNA     agg gat att tcc caa agc atc ctc tat ctt cag atg aac acc ctg aaa gct gaa gac act
                                                                                                                              
  AABR03050896  IGHV7-2*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                       ___CDR3-IMGT____
                                               
                                               100 101 102 102A103 104 105 106 107 108 
                                                A   T   Y       Y   C   V   R   N   A  
  RatNor_1_chr6 IGHV7-2*01 F V-REGION gDNA     gct aca tat ... tac tgt gta aga aat gca 
                                                                                       
  AABR03050896  IGHV7-2*01 F V-REGION gDNA     --- --- --- ... --- --- --- --- --- --- 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet