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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                               
                                                1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                E   M   K   L   M   E   S   G   G       G   L   V   *   P   G   Y   S   L   R 
  RatNor_2_chr6 IGHV7-8*01 P V-REGION gDNA     gag atg aag ctg atg gaa tct gga gga ... ggc ttg gta tag cct ggg tat tct ctg aga
                                                                                                                              
  AABR03049321  IGHV7-8*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                       _____________________CDR1-IMGT______________________    
                                               
                                                21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                L   S   C   A   A   S   R   V   T   Y                       T   D   F   K   M 
  RatNor_2_chr6 IGHV7-8*01 P V-REGION gDNA     ctc tcc tgt gca gct tct aga gtc acc tat ... ... ... ... ... act gat ttc aaa atg
                                                                                                                              
  AABR03049321  IGHV7-8*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                               _______________C
                                               
                                                40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                I   C   L   *   Q   S   P   G   *   A   L   E   *   F   G   L   I   R   K   K 
  RatNor_2_chr6 IGHV7-8*01 P V-REGION gDNA     atc tgt ttg tga cag tca cca ggg tag gca ctt gag taa ttt ggt ttg att aga aag aaa
                                                                                                                              
  AABR03049321  IGHV7-8*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                               DR2-IMGT________________                                                        
                                               
                                                60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                A   N   G   Y   T   T   V   Y   S   S   S   V   K       G   Q   F   T   I   S 
  RatNor_2_chr6 IGHV7-8*01 P V-REGION gDNA     gct aat ggt tac aca aca gtg tac agt tca tct gtg aag ... ggt caa ttc acc atc tcc
                                                                                                                              
  AABR03049321  IGHV7-8*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                               
                                               
                                                80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                R   D   N   S   Q   N   I   L   Y   L   Q   M   N   T   L   G   A   E   D   T 
  RatNor_2_chr6 IGHV7-8*01 P V-REGION gDNA     aga gac aat tcc caa aac att ctc tat ctt caa atg aac act ctg gga gct gag gac act
                                                                                                                              
  AABR03049321  IGHV7-8*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                       ___CDR3-IMGT____
                                               
                                               100 101 102 102A103 104 105 106 107 108 
                                                A   T   Y       Y   S   A   R   D   V  
  RatNor_2_chr6 IGHV7-8*01 P V-REGION gDNA     gcc act tac ... tac tct gca aga gat gta 
                                                                                       
  AABR03049321  IGHV7-8*01 P V-REGION gDNA     --- --- --- ... --- --- --- --- --- --- 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet