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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                
                                                 1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                 Q   V   S   L   K   E   S   G   P       G   I   L   Q   P   F   Q   T   L   S 
  RatNor_3_chr6 IGHV8-16*01 F V-REGION gDNA     cag gtt agt ctg aaa gag tct ggc cct ... ggg ata ttg cag ccc ttc cag acc ctc agt
                                                                                                                               
  AABR03050883  IGHV8-16*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                        _____________________CDR1-IMGT______________________    
                                                
                                                 21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                 L   T   C   S   F   S   G   F   S   L   G               T   S   N   M   G   V 
  RatNor_3_chr6 IGHV8-16*01 F V-REGION gDNA     ctg act tgc tct ttc tct gga ttt tca ctg ggc ... ... ... act tct aat atg ggt gtt
                                                                                                                               
  AABR03050883  IGHV8-16*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- ... ... ... --- --- --- --- --- ---


                                                                                                                _______________C
                                                
                                                 40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                 G   W   I   R   Q   T   S   G   K   G   L   E   Y   L   A   T   I   W   W   D 
  RatNor_3_chr6 IGHV8-16*01 F V-REGION gDNA     ggt tgg att cgt cag act tca ggg aag ggc ctg gag tat ttg gca acc att tgg tgg gat
                                                                                                                               
  AABR03050883  IGHV8-16*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                DR2-IMGT________________                                                        
                                                
                                                 60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                             D   D   K   Y   F   N   P   S   L   N       S   R   L   T   V   S 
  RatNor_3_chr6 IGHV8-16*01 F V-REGION gDNA     ... ... ... gat gat aag tac ttc aat cca tca ctg aat ... agt cgg ctc aca gtc tcc
                                                                                                                               
  AABR03050883  IGHV8-16*01 F V-REGION gDNA     ... ... ... --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                                
                                                
                                                 80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                 K   D   T   S   N   N   Q   A   F   L   K   I   T   S   V   D   T   A   D   T 
  RatNor_3_chr6 IGHV8-16*01 F V-REGION gDNA     aag gac acc tcc aat aac caa gca ttc ctg aag atc act agt gtg gac acg gcg gat act
                                                                                                                               
  AABR03050883  IGHV8-16*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                        ___CDR3-IMGT____
                                                
                                                100 101 102 102A103 104 105 106 107 
                                                 G   T   Y       Y   C   T   Q   R  
  RatNor_3_chr6 IGHV8-16*01 F V-REGION gDNA     ggc aca tat ... tac tgt act cag aga c
                                                                                    
  AABR03050883  IGHV8-16*01 F V-REGION gDNA     --- --- --- ... --- --- --- --- --- -

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet