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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                                 
                                                  1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                  Q   I   Q   L   V   Q   S   G   P       E   L   K   K   P   G   E   S   V   K 
  RatNor_2_chr6 IGHV9-3*01 ORF V-REGION gDNA     cag atc cag ttg gta cag tct gga cct ... gaa ctg aag aag cct gga gag tca gtg aag


                                                                         _____________________CDR1-IMGT______________________    
                                                 
                                                  21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                  I   S   C   K   A   S   G   Y   T   F                       T   D   Y   A   M 
  RatNor_2_chr6 IGHV9-3*01 ORF V-REGION gDNA     atc tcc tgc aag gct tct ggg tat acc ttc ... ... ... ... ... aca gac tat gca atg


                                                                                                                 _______________C
                                                 
                                                  40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                  N   W   V   K   Q   A   P   G   N   G   L   K   W   M   G   W   I   N   T   Q 
  RatNor_2_chr6 IGHV9-3*01 ORF V-REGION gDNA     aac tgg gtg aaa cag gct cca gga aat ggc ttg aag tgg atg ggc tgg atc aac acc caa


                                                 DR2-IMGT________________                                                        
                                                 
                                                  60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                          T   G   K   P   T   Y   A   D   D   F   K       Q   R   F   V   F   S 
  RatNor_2_chr6 IGHV9-3*01 ORF V-REGION gDNA     ... ... act gga aag cca aca tat gcg gat gat ttc aaa ... caa cgg ttt gtc ttc tct


                                                                                                                                 
                                                 
                                                  80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                  L   E   T   S   A   S   T   A   Y   L   Q   I   N   N   L   N   I   E   D   T 
  RatNor_2_chr6 IGHV9-3*01 ORF V-REGION gDNA     ttg gaa act tct gcc agc act gca tac ttg cag atc aac aac ctc aat att gag gac aca


                                                                         CDR3-IMG
                                                 
                                                 100 101 102 102A103 104 105 106 
                                                  A   T   Y       F   C   T   R  
  RatNor_2_chr6 IGHV9-3*01 ORF V-REGION gDNA     gct aca tat ... ttc tgt aca aga 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet