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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                               
                                                1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                *   I   Q   L   V   Q   S   *   P       E   L   K   K   P   G   E   P   V   R 
  RatNor_2_chr6 IGHV9-5*01 P V-REGION gDNA     tag ata cag ttg gta cag tct tga cct ... gag ctg aag aaa cct gga gag cca gtg agg
                                                                                                                              
  AABR03049321  IGHV9-5*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                       _____________________CDR1-IMGT______________________    
                                               
                                                21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                I   S   C   Q   A   P   R   Y   I   F                       T   Q   Y   R   A 
  RatNor_2_chr6 IGHV9-5*01 P V-REGION gDNA     atc tcc tgc cag gct cct agg tat atc ttc ... ... ... ... ... aca cag tat aga gcg
                                                                                                                              
  AABR03049321  IGHV9-5*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                               _______________C
                                               
                                                40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                T   R   V   K   Q   T   P   G   K   G   G   K   W   M   G   W   I   N   T   Q 
  RatNor_2_chr6 IGHV9-5*01 P V-REGION gDNA     acc cgg gtg aaa cag act cca gga aag ggt ggg aag tgg atg ggc tgg atc aac acc caa
                                                                                                                              
  AABR03049321  IGHV9-5*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                               DR2-IMGT________________                                                        
                                               
                                                60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                        T   G   E   P   T   *   A   D   D   F   K       G   W   F   V   S   S 
  RatNor_2_chr6 IGHV9-5*01 P V-REGION gDNA     ... ... act ggg gag cct aca tag gct gat gac ttc aaa ... gga tgg ttt gtc tcc tct
                                                                                                                              
  AABR03049321  IGHV9-5*01 P V-REGION gDNA     ... ... --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                               
                                               
                                                80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                L   E   I   S   S   S   P   V   Y   F   Q   I   S   N   L   K   N   E   D   T 
  RatNor_2_chr6 IGHV9-5*01 P V-REGION gDNA     ttg gaa atc tct tcc agc cct gta tat ttt cag atc agc aac ctc aaa aat gag gac aca
                                                                                                                              
  AABR03049321  IGHV9-5*01 P V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                       CDR3-IMG
                                               
                                               100 101 102 102A103 104 105 106 
                                                A   T   H       I   R   S   K  
  RatNor_2_chr6 IGHV9-5*01 P V-REGION gDNA     gct aca cat ... att cgt tca aaa 
                                                                               
  AABR03049321  IGHV9-5*01 P V-REGION gDNA     --- --- --- ... --- --- --- --- 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet