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When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

	
	
	                                                                                
                                               
                                                1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                                Q   I   Q   L   V   Q   S   G   P       E   V   K   K   P   G   E   S   V   K 
  RatNor_2_chr6 IGHV9-8*01 F V-REGION gDNA     cag att cag ttg gta cag tct gga cct ... gag gtg aag aag cct gga gag tca gtg aag
                                                                                                                              
  AABR03049153  IGHV9-8*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


                                                                       _____________________CDR1-IMGT______________________    
                                               
                                                21  22  23  24  25  26  27  28  29  30  31  32 32.1 33  34  35  36  37  38  39 
                                                I   S   C   K   A   S   G   Y   T   F                       T   Q   A   G   M 
  RatNor_2_chr6 IGHV9-8*01 F V-REGION gDNA     atc tcc tgc aag gct tct ggg tat acc ttt ... ... ... ... ... aca cag gct gga atg
                                                                                                                              
  AABR03049153  IGHV9-8*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... --- --- --- --- ---


                                                                                                               _______________C
                                               
                                                40  41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                                Q   W   L   K   Q   A   Q   G   K   S   L   K   W   M   G   W   I   N   T   N 
  RatNor_2_chr6 IGHV9-8*01 F V-REGION gDNA     cag tgg ctg aaa cag gct caa gga aag agc ttg aag tgg atg ggc tgg atc aac acc aac
                                                                                                                              
  AABR03049153  IGHV9-8*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                               DR2-IMGT________________                                                        
                                               
                                                60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                        T   G   K   T   T   Y   A   A   D   F   T       G   R   F   V   F   S 
  RatNor_2_chr6 IGHV9-8*01 F V-REGION gDNA     ... ... act ggg aag aca aca tat gct gct gac ttc aca ... ggg agg ttt gtc ttc tct
                                                                                                                              
  AABR03049153  IGHV9-8*01 F V-REGION gDNA     ... ... --- --- --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- ---


                                                                                                                               
                                               
                                                80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                                L   E   T   S   A   S   T   A   Y   L   Q   I   T   N   L   K   N   E   D   M 
  RatNor_2_chr6 IGHV9-8*01 F V-REGION gDNA     ttg gaa acc tcg gcc agc act gca tat ttg cag atc acc aac ctc aaa aat gag gac atg
                                                                                                                              
  AABR03049153  IGHV9-8*01 F V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                                                       CDR3-IMG
                                               
                                               100 101 102 102A103 104 105 106 
                                                A   T   Y       F   C   A   R  
  RatNor_2_chr6 IGHV9-8*01 F V-REGION gDNA     gct aca tat ... ttc tgt gca aga 
                                                                               
  AABR03049153  IGHV9-8*01 F V-REGION gDNA     --- --- --- ... --- --- --- --- 

This alignment of allele is generated by IMGT/OutilAllele (Patrice Duroux and Mehdi Yousfi).

Created:
09/02/2016
Last updated:
02/08/2016
Authors:
Mélanie Arrivet