Alignment of alleles: Five-ray yellowtail (Seriola quinqueradiata) IGIV1S28

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   V   T   V   T   Q   P   G   A       V   S   S   A   L   G   R   S   V   T 
  AB062629,IGIV1S28*01          CAG GTC ACA GTG ACT CAG CCT GGA GCA ... GTG AGC TCT GCT CTG GGA CGC TCC GTC ACC

                                                        _________________CDR1-IMGT______________________        
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 I   S   C   R   V   S   Q   N   V   Y   T   Q   G   G   Q   I   P       F   A 
  AB062629,IGIV1S28*01          ATC AGC TGT AGG GTC AGT CAG AAT GTT TAT ACT CAA GGA GGC CAA ATT CCG ... TTT GCC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   R   Q   R   D   G   E   P   P   K   A   L   I   Y   R   A   T         
  AB062629,IGIV1S28*01          TGG TAC CGG CAG AGA GAT GGT GAA CCT CCA AAA GCT CTT ATT TAT AGG GCT ACT ... ...

                                GT__________________                                                            
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     T   R   L   S   G   T   P       S   R   F   T   G   S   G 
  AB062629,IGIV1S28*01          ... ... ... ... ... ACT AGA CTA TCA GGA ACT CCA ... AGT CGT TTT ACA GGC AGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   Y   S   D   F   T   L   T   I   S   G   V   Q   T   E   D   A   G 
  AB062629,IGIV1S28*01          ... ... TCA TAC AGT GAC TTC ACT CTG ACC ATC AGT GGA GTC CAG ACT GAA GAT GCA GGA

                                                _______________CDR3-IMGT____________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 114 115
                                 L   Y   Y   C   Q   S   G   H   I   I   N   S   L   W   V  
  AB062629,IGIV1S28*01          CTT TAT TAC TGT CAG AGT GGT CAT ATT ATC AAC AGC CTG TGG GTG  #c


#c: rearranged cDNA


This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 06/05/2003
Author: Nathalie Bosc

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For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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