Alignment of alleles: Five-ray yellowtail (Seriola quinqueradiata) IGIV1S41

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 N   V   V   V   T   Q   S   A   A       K   S   V   Q   V   G   Q   T   V   S 
  AB062647,IGIV1S41*01          AAT GTT GTT GTG ACT CAG TCA GCA GCC ... AAA TCA GTG CAG GTT GGT CAA ACT GTC TCT

                                                        _________________CDR1-IMGT______________________        
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 V   D   C   R   A   S   P   T   V   P   H   Y   T   G   S   Q   Y   Y   L   S 
  AB062647,IGIV1S41*01          GTT GAC TGT AGG GCC AGT CCA ACA GTA CCT CAC TAC ACT GGT TCA CAA TAC TAC CTG TCC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   L   Q   K   P   G   E   A   P   K   L   L   I   Y   R   T   S         
  AB062647,IGIV1S41*01          TGG TAC CTT CAG AAA CCT GGA GAA GCT CCT AAA CTT CTG ATC TAC AGA ACA TCA ... ...

                                GT__________________                                                            
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     D   R   F   S   G   I   S       S   R   F   S   G   N   G 
  AB062647,IGIV1S41*01          ... ... ... ... ... GAC AGA TTT TCA GGA ATC TCC ... TCC AGA TTC AGT GGA AAT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 A   G   N   G   V   D   F   T   L   T   I   S   G   V   Q   A   E   D   A   G 
  AB062647,IGIV1S41*01          GCA GGG AAT GGA GTT GAC TTC ACT CTG ACC ATC AGT GGA GTC CAG GCT GAA GAT GCA GGA

                                                _______________CDR3-IMGT____________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 114 115
                                 V   Y   Y   C   Q   S   Y   H   Y   I   N   S   Q   W   V  
  AB062647,IGIV1S41*01          GTT TAC TAC TGT CAG AGT TAT CAC TAC ATC AAC AGT CAG TGG GTG  #c


#c: rearranged cDNA


This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 06/05/2003
Author: Nathalie Bosc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Res., 27:209-212 (1999); doi: 10.1093/nar/27.1.209 Full text Cover; Ruiz, M. et al., Nucleic Acids Res., 28:219-221 (2000); doi: 10.1093/nar/28.1.219 Full text; Lefranc, M.-P., Nucleic Acids Res., 29:207-209 (2001); doi: 10.1093/nar/29.1.207 Full text; Lefranc, M.-P., Nucleic Acids Res., 31:307-310 (2003); doi: 10.1093/nar/gkg085 Full text; Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5:45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33:D593-597 (2005); doi: 10.1093/nar/gki065 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 37:D1006-1012 (2009); doi: 10.1093/nar/gkn838 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 43:D413-422 (2015); doi: 10.1093/nar/gku1056 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

CNRS Université de Montpellier European Commission
IMGT® Founder and Executive Director Emeritus:
Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr
IMGT® Director:
Sofia Kossida Sofia.Kossida@igh.cnrs.fr
Bioinformatics manager:
Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr
Computer manager:
Patrice Duroux Patrice.Duroux@igh.cnrs.fr
Webmaster:
Amélie Houles

Citing IMGT | Warranty disclaimer and copyright notice | Privacy policy and advertisement policy

© Copyright 1995-2017 IMGT®, the international ImMunoGeneTics information system®