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Alignment of alleles: Zebrafish (Danio rerio) IGIV1S7

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CHS and in pages edited before 14/10/2009).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   V   T   V   T   Q   S   P   A   V   K   S   I   T   Q   G   E   T   L   T 
  AF246192,IGIV1S7*01           CAA GTG ACA GTG ACT CAG AGT CCA GCA GTC AAA TCC ATC ACA CAA GGA GAA ACT CTG ACC

                                                        _________________CDR1-IMGT______________________        
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 I   N   C   K   T   S   Q   P   I   S   G   C   S   N   C               V   S 
  AF246192,IGIV1S7*01           ATC AAC TGT AAA ACC AGT CAG CCC ATA TCT GGC TGT AGT AAC TGT ... ... ... GTG TCC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   P   G   E   A   P   K   L   L   I   K   Y   I   N         
  AF246192,IGIV1S7*01           TGG TAT CAG CAG AAA CCT GGA GAA GCT CCT AAA CTC CTG ATT AAA TAT ATA AAC ... ...

                                GT__________________                                                            
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     S   R   Y   S   N   T   P       S   R   F   S   G   G   G 
  AF246192,IGIV1S7*01           ... ... ... ... ... AGC CGT TAC TCA AAC ACT CCA ... TCT AGA TTC AGT GGT GGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 S   D   Y   G   S   D   F   T   L   N   I   S   G   V   Q   T   E   D   A   G 
  AF246192,IGIV1S7*01           TCT GAC TAT GGC AGT GAT TTT ACT CTG AAC ATC AGT GGA GTC CAG ACT GAA GAT GCT GGA

                                                _________CDR3-IMGT______________
                                101 102 103 104 105 106 107 108 109 110 111 112
                                 D   Y   Y   C   L   S   Y   H   S   G   E   C  
  AF246192,IGIV1S7*01           GAT TAT TAC TGT CTG AGT TAC CAC AGT GGT GAG TGT  #c

#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 17/04/2003
Author: Nathalie Bosc
Contact: Marie-Paule Lefranc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.

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