Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.
Letters in red correspond to amino acids which are polymorphic in the other alleles.
For C-REGIONs, letters in bold correspond to additional positions in the IMGT unique numbering.
For C-REGIONs, letters between parentheses correspond to amino acids resulting from the splicing.
N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CH-S and in pages edited before 14/10/2009).
Ma's night monkey (Aotus nancymaae) TRAV subgroup names are according to the human TRAV subgroup names (Protein display: Human TRA V-REGIONs)
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TRAV FR1-IMGT CDR1-IMGT FR2-IMGT CDR2-IMGT FR3-IMGT CDR3-IMGT
gene (1-26) (27-38) (39-55) (56-65) (66-104) (105-115)
__________________________ __________________________ ____________ _________________ __________ __________________________________________ ___________
1 10 20 30 40 50 60 70 80 84ABC 90 100 110
.........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|............|.........|.... .....|.....
#c AF027543,TRAV5 SVVINCTYT DSSSSY...... LYWYKQEPGASLQLLAY ILSNTD.... TKQDQ.......RLTVQLDKKNKHLSLSIAETQTGDSAIYFC AES
#c AF027557,TRAV9S1 VLLNEGDSLTVNCSYE STGYPS...... LFWYVQYPGKGPELLLK AMKGND.... KGRSNT......DFEAIYRTETTSFHLEKGSVRESDSAVYFC ALS
#c AF027561,TRAV12S1 VEQDPGAFNVPEGTTVAFNCTYS NSVSQY...... FFWYRQDPRKGPKLLMS VYSSG..... N.EDG.......RFTAQLDRASQHVSLLIRDSQLSDSATYLC AEI
#c AF027546,TRAV12S2 IASLNCTYS DRGSQS...... FYWYRQYSGKSPELLMS IYSNG..... DEEDG.......RFTAQLNRASQHVSLLIRDSQLSDSATYLC AVS
#c AF027560,TRAV13S1 SSVINCTYS DSASNY...... FPWYKQELGKGPRLIIE IRSNVD.... KRKDG.......RMTVLLNKMAKHFSLHITDTQPGDSALYFC AVL
#c AF027556,TRAV17 NATMNCSYK TSITS....... LQWYRQDSSRGLTQLIL IRSNER.... EKYSG.......RLRVTLDTFTKSSSLFVAAAQAADTAAYFC ATR
#c AF027550,TRAV19 TQAQTEISVVEKEDVTLDCLYE TSDTTYY..... LYWYKQPPTREMIFLIR QNSFNEQ... NEING.......RYSWNFQRSTSSFNFTITASQVIDSAVYFC ALRA
#c AF027541,TRAV21 GLVLNCSFT DSAIYN...... LQWFRQDPGKGLTSLLL IQSSQR.... EQTSG.......RLNASLDKSSGHSTLYIAASQPGDSATYLC AVR
#c AF027558,TRAV29 LSILNCDYT SNMFDY...... FLWYKRYPAEGPAILIS IRSATD.... QNKDG.......RFTVFLNESAKHLSLHIAASQPGDSAVYLC AAS
#c : rearranged cDNA
Created: 27/03/2003
Author: Géraldine Folch
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
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IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr |
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Citing IMGT © Copyright 1995-2012 IMGT®, the international ImMunoGeneTics information system® |
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