IMGT Web resources: IMGT repertoire

Protein display: Common carp (Cyprinus carpio) IGI V-REGIONs

Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CH-S and in pages edited before 14/10/2009).

One pseudogene has been included (1)

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       IGIV                        FR1-IMGT            CDR1-IMGT        FR2-IMGT      CDR2-IMGT                 FR3-IMGT                  CDR3-IMGT
       genes                        (1-26)              (27-38)         (39-55)        (56-65)                  (66-104)                  (105-115)
__________________________ __________________________ ____________  _________________ __________ _______________________________________ ____________
                           1       10        20         30 32A      40        50         60         70        80        90        100        110
                           .........|.........|...... ...|......... .|.........|..... ....|..... ....|.........|.........|.........|.... .....|.....

#c AB015897,IGIV1S1               PSVAAVQPGETVTINCQTS RGIGDQSRGCGSC LTWYLQKPGEAPKLLIY YIR....... SRQSGTS.SRFSGNGANYGTDFTLTISGVQTEDAGHYYC QSAHYISSSW
#c AB073328,IGIV1S2        QISVTQSPSTTAAQPGETVKINCRTS TDVAEY.SAPRYY LSWYLQKPGEAPKLLIH LAN....... TLQSGTP.SRFSGSAS.SATDFTLTISGVQTEDAGHYYC QSVHVINSVN
#c AB073330,IGIV1S3        QISVTQSPSTTAAQPGETVKISCRTS RDVAEY.SAPRYY LSWYLQKPGEAPKLLIY RTI....... DRYTGIP.SRFSGSG..SNSDFTLTISGVQTEDAGHYYC QSVHSGG
#c AB015901,IGIV1S4               PAVKPVQPGDTVSMSCKTS PEVYQS.WDYEP. LAWYLQKPGEAPKLLIY KSN....... VLQSGTP.SRFSGSG..SKTDFTLTISGVQTEDAGHYYC MSVHVINSGG
#c AB015898,IGIV1S5               PSVKTVTPGENVVMSCKLS TPAPCS.PAPC.. VSWYLQKPGEAPKLLIY LTN....... TLQSGTP.SRFSGSG..SNSDFTLTISGVQTEDAGHYYC QSWHYINSKY
#c AB015900,IGIV1S6               PSLKTVTPGENVVMSCKLS TPTTAC.SPAC.. VFWYLQKPGEAPKLLIR YVK....... TLQSGTP.SRFSGSG..SGTDFTLTISGVQTEDAGHYYC QSFHSTGGY
#c AB073329,IGIV1S7        QITVTQTPSVKTVTPGENVVMNCKFS SAPSY........ VSWYLQKPGEAPKLLIY YTN....... TLQSGTP.SRFSGSG..SGTDFTLTISGVQTEDAGHYYC QSAYSISSSW
#c AB015899,IGIV1S8               P.VKPVTPGENVVMSCKFS SAPSY........ VSWYLQKPGEAPKLLIY LTS....... TLQSGTP.SRFSGSG..SNSDFTLTISGVQTEDVGHYYC LSAHYISSSW
#c AB073339,IGIV1S9        QISVTQSPSTTAAQAGETVKISCRTS TDVYRY.SSGDED LFWYLQKPGEAPKLLIY YAK....... KLYTGTP.SRFSGSG..SKSDFTLTISGVQTEDAGHYYC QSYHSSGG
#c AB073341,IGIV1S10       QISVTQSPS.TAAQPGETVKISCKTS SDVYRW.SDGNEG LAWYLQKPGEAPKLLIY AAN....... TLQSGTP.SRFSGSG..SNSDFTLTISGVQTEDAGHYYC QSYHYINSIN
#c AB073335,IGIV1S11       QISVTQSPSTTAAQPGETVKISCRTS RDVFRY.SGVDR. LAWYLQKPGEAPKLLIY YTN....... TLQSGTP.SRFSGSG..SNSDFTLTISGVQTEDAGHYYC QSFHCRTSGV
#c AB073336,IGIV1S12       QISVTQSPSTTAAQPGETVKINCRTS TNVYLS.GSDHC. LAWYLQKPGEAPKRLIY YAN....... RLQSGTP.SRFSGSG..SNSDFTLTISGVQTEDAGHYYC QSLHSGS
#c AB073337,IGIV1S13       QISVTQSPS.TAAQPGETVKISCKTS TDVYDG.DS.... LFWYLQKPGEAPKLLIY LAN....... TLESGTP.SRFSGSG..SNSDFTLTISGVQTEDAGHYYC QSAHYISSSW
#c AB073338,IGIV1S14       QYTVTQSPSLITAAQGQEVRINCKTS SSVCGT.NY.... LHWYLQKPGEAPKLLIY AAT....... SRYTGTP.SRFIGSG..SNSDFTLTISGVQTEDTGDYYC QSYHCSSSA
#c AB073340,IGIV1S15       QITVTQSPSITAAQPGQEVRINCKTS SNVYGG.SY.... LHWYLQKPGEAPKLLIY AAT....... SRNTGTP.SRFSGSG..SNSDFTLTISGVLTEDTGDYYC QSFHWPGSTR
#c AB073342,IGIV1S16       QITVTQSPSITAAQPGQEVRINCKTS SNVYGG.NY.... LAWYLQKPGEAPKLLIY WAT....... SRYTGTP.SRFSGSG..SNSDFTLTISGVQTEDTGDYYC QSYHEISSKA
#c AB073331,IGIV1S17       SHEEVQSPDSLLVKAGDSASISCTAS SGIGYN....... LSWYLLKPGKTPKLLIY GTS....... NLASGVS.GRFSGTY..SGYVFTVNIRGVQPEDAGVYYC MGYYSFSV
#c AB073332,IGIV1S18       SHEEVQSPESLSVKAGESVSISCTGT SGVGDD....... MSWYLQKPGEAPKLLIY TAS....... ELESGVP.DRFSGSG..SEPDFTLNIRGVQSEDAGVYYC MGVYSGG
#c AB073333,IGIV1S19       SHEEVQTPESLSVKAGESVSISCTAS SGIGYD....... MSWYLLKPGKKPKLLIY GTS....... NLASGVS.DRFSGTY..SGYEFTLKIRGVQSEDAGVYYC MGCYSFSE
#c AB073334,IGIV1S20       SHEEVQCPEFLSVKAGESVSISCTGT SGVDDY....... MSWYLQKPGEAPKLQIY KAS....... RLQSGVP.DRFSGTY..SGYVFTLNIRGVQSEDAGVYYC MGAYSGG
#c AB091112,IGIV2S1        VIVVTQNPPVLTLSTGQTATLDCNLD TVTDSG....... ARWYKQIHGGVPQFVLV LYHPNSSPT. YGSGYSS.PKFNSNH.KTKSDYSLIISSVDVDDSAVYYC YTWDSSAKEY
#c AB103560,IGIV2S2        VIVVTQNPPVLTLSTGQTATLDCNLD TVTNSA....... ARWYKQIHGGVPQFVLY FYHANSSPT. YGSGYSS.HKFNSNH.KTKSDYSLIISSVDVDDSAVYYC YTWDSSAKEY
#c AB103562,IGIV2S3 (1)    VIVVTQNPPVLTLSTGQTATLDCNLD TVTDSA....... ARWYKQIHGGVPQFVLY FYHPNSSPT. YGSGYSS.PKFNSNH.KTKSDYSLIISSVDVDDSAVYYC KTWDDTAKET
#c AB103559,IGIV2S4        VIVVTQNPPVLTLSTGQTATLDCNLD TVTNSA....... ARWYKQIHGGVPQFVLY FYHANSSPT. YGSGYSS.PKFNSNH.KTKSDYSLIISSVDVDDSAVYYC YTWDSSAKEY
#c AB103561,IGIV2S5        VIVVTQNPPVLTLSTGQTATLDCNLD TVTNSA....... ARWYKQIHGGVPQFVLY FYHPNSSPT. YGSGYSS.PKFNSNH.KTKSDYSLIISSVDVDDSAVYYC YTWDSSAKEY
#c AB091113,IGIV2S6        VKVVTQKPAILTEQKGISVTMDCNIK KPENYY....... VSWYKQIPNAAPQYVLR YYHSHSSPDE YGDGFSS.SRFTSKA.PSNIDYQLIISNVDVTDSAVYYC CTWDDTAKEN
#c AB103563,IGIV2S7        VKVVTQKPSILTEQKGRSVTMDCNIE KDDGYY....... GGWYKQIPNAAPQFVLR YYHSHSSPNK YGDGFSS.SRFTSNA.QSKIDYKLIISNVDVDDSAVYYC GTCDSSASEE
#c AB091115,IGIV2S8        VKVVTQKPSILTEQKGRSVTMDCNIE KDEGYY....... VGWYKQIPNAAPQFVLR YYHSHSSPNK YGDGFSS.SRFTSNA.QSKIDYKLIISNVDVDDSAVYYC GTCDSSASEE
#c AB103564,IGIV2S9        VKVVTQKPSILTEQKGRSVTMDCNIE KDEGYY....... VGWYKQIPNVVPQFVLR YYHSHNSPNK YGDGFSS.SRFTSNA.QSKIDYKLIISNVDVDDSAVYYC GTCDSSASEE

#c: rearranged cDNA

IMGT note:

(1) IGIV2S3 Pseudogene because DELETION of one nucleotide in L-REGION leading to a frameshift.

Created: 11/04/2003
Last updated: Monday, 11-Jul-2011 12:57:01 CEST
Author: Nathalie Bosc
Contact: Marie-Paule Lefranc

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