Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.
N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CH-S and in pages edited before 14/10/2009).
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TRAV FR1-IMGT CDR1-IMGT FR2-IMGT CDR2-IMGT FR3-IMGT CDR3-IMGT
gene (1-26) (27-38) (39-55) (56-65) (66-104) (105-115)
__________________________ __________________________ ____________ _________________ __________ __________________________________________ ___________
1 10 20 30 40 50 60 70 80 84ABC 90 100 110
.........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|............|.........|.... .....|.....
AF110525,TRAV1S1 EDKVMQPPEDVVAAEGDTVTLDCTFQ TTDTSPY..... LFWYKQDGTSRPQFILR RFKGDEGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
AF110525,TRAV1S2 EDKVMQPPEDVVAAEGDTVTLDCTFQ TSDTSPN..... LFWYKQDGTSRPQFILR RFKGDEGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
AF110526,TRAV1S3 EDKVMQRPEDVVAAEGDTVTLDCTFQ TTGSSPY..... LFWYKQDGTSRPQFIVS RVNGDKGKTE DEFKE.......RFSSTLNPTMKSAPLKIQELQLSDSAVYYC ALS........
AF110526,TRAV1S4 EDKVMQPPEDVVAAEGDTVTLDCTFQ TTDPSPN..... LFWYKQDGTSRPQFILS KFTFGQGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
AF110526,TRAV1S5 EDKVMQPPEDVVAAEGDTVTLDCTFQ TTDTNLY..... LFWYKQDGTSRPQFILS KFTIGKGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
AF269200,TRAV1S6 EDKVMQPPEDVVAAEGDTVTLDCTFQ TSDTSPN..... LFWYKQDGTSRPQFILS RVKADKGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
#c AF269222,TRAV1S7 EDKVMQQPEDVVAAEGDTVTLDCTFQ TTDTNLY..... LFWYKQEGTSRPQFILS RFKGDKGKTE DEFKE.......RFSSTVNSTMKSAPLKIQELQLSDSAVYYC ALS
AF269201,TRAV2S1 EDKVMQPPEDVVAAEGDTVTLDCTFQ TTDTSPY..... LFWYKQENNKFPKLLLR AKQK...... PSDPQ.......RISAFINK..TSVPLKIQELQLSDSAVYYC ALR........
AF269202,TRAV2S2 EDKVMQPPEDVVAAEGDTVTLDCTFQ TTDTSPN..... LFWYKQENNKFPKLLLR AKQK...... PSDPQ.......RISAFINK..TSVPLKIQELQLSDSAVYYC ALR........
AF269203,TRAV2S3 EDKVMQPPEDVVAAEGDTVTLDCTFQ TSDTSPY..... LFWYKQENNKFPKLLLR AKQK...... PSDPQ.......RISAFINK..TSVPLKIQELQLSDSAVYYC ALR........
AF110525,TRAV3S1 KDTVLQPKAEEMAAEDQTVTLDCHYT STATDVY..... IFWYKQDGTSRPQFILS RFTFGKGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
AF110526,TRAV3S2 KDTVLQPKAEEMAAEDQTVTLDCHYT STATEEVY.... IFWYKQDGTSRPQFILS RFTFGKGKTE DEFKE.......RFSSTLNPTMKSAPLKIQELQLSDSAVYYC ALR........
AF110526,TRAV3S3 KDTVLQPKAEEMAAEDQTVTLDCHYT STVTDVN..... IFWYKQDGTSRPQFILS RFTIGKGKTE DEFEE.......RFSSTLNPTMKSAPLKIQELQLSDSAVYYC ALR........
AF269207,TRAV3S4 KDTVLQPKAEEMAAEDQTVTLDCHYT STATSDY..... IFWYKQDGTSRPQFILS RFKGDKGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
AF269208,TRAV3S5 KDTVLQPKAEEMAAEDQTVTLDCHYT STATDVN..... IFWYKQEGTSRPQFILS RVKGDKGKTE DEFKE.......RFSSTLNSTMKSAPLKIQELQLSDSAVYYC ALR........
AF110525,TRAV4S1 ISPVPGMKNGISSREGEDVTLRCNYE TSHSDVY..... LFWYKHQSDYEAPQFIL WKGARSNTG. EENIP.......DKRYRCNTGQQESELTITDVTLADSAVYYC ALR........
AF110526,TRAV4S2 ISPVPGMKNGISSREGEDVTLRCNYE TSESYVL..... LYWYKHQSDYEAPQFIL WKGARSYTG. EEDIP.......DKRYRCNTGQQESELTITDVTLADSAVYYC ALR........
AF110526,TRAV4S3 ISPVPGMKNGISSREGEDVTLRCNYE TSHSDVY..... LVWYKHQSDYEAPQFIL WKGARSNTG. .QYIP.......DQRYRCNTGQQESELTITDVTLADSAVYYC ALR........
#c: rearranged cDNA.
Created: 01/07/2003
Author: Nathalie Bosc
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
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IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr |
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