IMGT Web resources: IMGT repertoire

Protein display: Yellowbelly rockcod (Notothenia coriiceps) IGH V-REGIONs

Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

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       IGHV                          FR1-IMGT           CDR1-IMGT       FR2-IMGT      CDR2-IMGT                 FR3-IMGT                  CDR3-IMGT
       gene                           (1-26)             (27-38)        (39-55)        (56-65)                  (66-104)                  (105-115)
___________________________ __________________________ ____________ _________________ __________ _______________________________________ ___________
                            1       10        20         30         40        50         60         70        80        90        100        110
                            .........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|.........|.........|.... .....|.....

#c AF437738,IGHV1S1         GQTLTESEP.VTKRPGESHRLTCTAS GFTFSSSY.... MNWVRQAAGKGLEWIAY IYPSSSTV.. YYSESVK.GRFTISRDNNRQQVYLQMNSLTAVDSAVYYC ARV 
#c AF437739,IGHV1S2         GQTLTESDS.VTKRPGESHRLTCTAS GVDFGSSW.... MAWIRQAPGKGLEWVAI IEHDSDRI.. YYSESVK.GRFTISRENNRQQLYLQMNSLTAVDSAVYYC ARA
#c AF437740,IGHV1S3         GQTLTESDS.VTKRPGESHRLTCTAS GFTFSSHW.... MAWVRQAPGKGLEWVAI MHPTSSAHI. YYSESVK.GRFTISRDNSRQQVYLQMSSLTAVDSAVYYC ARE
#c AF437741,IGHV1S4         GQTLTESDS.VTKRPGESHRLTCTAS GFTFSSIY.... MAWIRQAPGKGLEWIAY IGTSSSPI.. SYSQSVQ.GRFTISRDDSSSKMYLQMNSLKAEDTAVYYC ARW

#c: rearranged cDNA

The proteolytic cleavage site between the leader peptide and the V-REGION is putative and the assignment of amino acid 1 to one or the other region is uncertain.

Created: 01/08//2002
Author: Nathalie Bosc
Contact: Marie-Paule Lefranc

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