Protein display: Atlantic salmon (Salmo salar) IGIV

Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CH-S and in pages edited before 14/10/2009).

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        IGIV                        FR1-IMGT            CDR1-IMGT       FR2-IMGT       CDR2-IMGT                 FR3-IMGT                    CDR3-IMGT
       genes                         (1-26)              (27-38)        (39-55)         (56-65)                  (66-104)                    (105-115)
___________________________ __________________________ ____________ _________________ __________ __________________________________________ ____________
                            1       10        20         30         40        50         60         70        80  84ABC   90       100        110
                            .........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|............|.........|.... .....|.....

#c AF273017,IGIV1S1         QVTVTQTPAVKSVSVGNSVSLSCKTS SAVYSDSNGHY. LHWYQQKPGGAPELLIY WAK....... TLQSGTP.SRFSGSG..SG...SDFTLTISGVQAEDAGDYYC QSYHSGYV
#c AF273019,IGIV1S2         QVTVTQTPAVKSVSVGHSVSLSCKTS SAVYSNSNGHY. LHWYQQKPGGAPELLIY WAK....... TLQSGTP.SRFSGSG..TG...SDFTLTISGVQAEDAGDYYC QSWHSGNV
#c AF273014,IGIV1S3         QVTVTQTPAVKTISVGDLVSLSCKTS SAVYSDRHGQR. LAWYQQKPGGAPELLIY LAK....... TLQSGIP.SRFSGSG..TG...SDFTLTISGVQAEDAGDYYC QSLHNPNSVWV
#c AF273012,IGIV1S4         QITVTQTPTVKAVVSGQTVSLNCKTS SDVHANVY.... VAWYQQKPGGAPELLIY TAT....... SLQSGTP.FRFSGSG..SG...SDFTLTISGVQAEDAGDYYC QSLHNPNSVWV
#c AF273013,IGIV1S5         QITVTQTPTVKAVVSGQTVSLNCKTS SDVHANVY.... VAWYQQKPGGAPELLIY TAT....... SLQSGTP.SRFSGSG..SG...SDFTLTISGVQAEDAGDYYC QSLHNPNSVWV
#c AF273021,IGIV1S6         QITVTQTPTVKAVVSGQTVSLNCKTS SDVHANVY.... VAWYQQKPGGAPELLIY TAT....... SLQSGTP.SRFSGSG..SG...SDFTLTISGVQAEDAGDYYC QSLHNPNSVWV
#c AF273015,IGIV1S7         QVTVTQTPAVKAVLTGQTVPLNCKTS SDVYQAGTSSPR LTWYQQKPGEAPKLLIY YAT....... TLQSGTP.SRFSGSG..TH...SDFTLTISGVQAEDAGDYYC QSFHYPNSKYV
#c AF273018,IGIV1S8         QVTVTQTPAVKAVLTGQTVPLNCKTS SDVYQAGTSSPR LAWYQQKPGEAPKLLIY YAT....... TLQSGTP.SRFSGSG..TH...SDFTLTISGVQAEDAGDYYC QSFHYPNSKYV
#c AF273020,IGIV1S9         QVTVTQTPAVKAVLTGQTVPLNCKTS SDVYQAGTSSPR LAWYQQKPGEAPKLLIY YAT....... TLQSGTP.SRFSGSG..TH...SDFTLTISGVQAEDAGDYYC QSFHYPNSKYV
   AF462235,IGIV1S10        DIILTQSPKSQSVRPGETVSISCTAS SSTYNN...... LQWYLQKPGEAPKLLVY STT....... NRQSGIP.GRFSGSG..SGSSYTQFTLTISGVQAEDAGDYYC QQGYSTPF...
   AF462236,IGIV1S11        DIILTQSPKSQSVRLGETVSISCTAS SSTSNN...... LHWYLQKPGEAPKLLVY SAT....... NRQSGIP.GRFSGSG..SGSSYTHYTLTISGVQAEDAGDYYC QQSNSYPF...
   AF462237,IGIV1S12        NLILTQSPKSQSVRPGKTVSISCTAS SSTGNN...... LHWYLQKPGEAPKLLVY YAT....... SRQSGIP.GRFSGSG..SG...SQFTLTISGVQEEDAGDYCC QQGYSTPF...
#c AF406956,IGIV1S13        DIILTQSPKSQSVRPGKTVSISCTAS SSISNY...... LSWYLQKPGEAPKLLVY RAT....... NRQSGIP.GRFSGSG..SG...SQFTLTISGVQEEDAGDYYC QQGASFPY
#c AF406958,IGIV1S14        DIILTQSPKSQSVRLGETVSISCTAS SSTGNN...... LHWYLQKPGEAPKLLVY STT....... SRQSGIP.GRFSGSG..SGSSYTHYTLTISGVQAEDAGDYYC QQGNSSPF
#c AF406957,IGIV1S15        DIILTQSPKSQSVRPGETVSISCTAS SSTYNN...... LQWYLQKPGEAPKLLVY STT....... NRQSGIP.GRFSGSG..SGSSYTQFTLTISGVQAEDAGDYYC QQGYSTPY
#c AF406964,IGIV2S1                                                          GAPQYVLR YYYTDDSPDE YGSGFSS.DRFTSKA.TSD...KDYQFIISNVEETDSAVYYC QTRNDSPYAL

#c: rearranged cDNA


Created: 16/05/2003
Author: Nathalie Bosc