Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
The IMGT allele table refers to the V-REGION polymorphism. It does not include polymorphisms in the other parts of the V-GENE. V-REGION alleles are only described for genes which have at least one Functional or ORF allele. The accession number of a reference sequence is given for each allele.
Nucleotide mutations and amino acid changes in CDR3-IMGT of rearranged sequences are not taken into account for the description of polymorphism.
Click on a gene name to get the alignment of the corresponding V-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).
| TRGV subgroup |
TRGV gene name |
Fct | TRGV allele name |
Breed | Accession number | confirmed by genetics and/or data |
Description of mutations |
| 1 | TRGV1S1 | (F) | V1S1*01 | Holstein | D16199 | ||
| TRGV1S2 | (F) | V1S2*01 | Holstein | D16123 | |||
| TRGV1S3 | (F) | V1S3*01 | Holstein | D16131 | |||
| 2 | TRGV2S1 | (F) | V2S1*01 | Holstein | D13648 | ||
| 3 | TRGV3S1 | (F) | V3S1*01 | Brown Swiss | U73186 | ||
| TRGV3S2 | (F) | V3S2*01 | Brown Swiss | U73187 | |||
| 4 | TRGV4S1 | (F) | V4S1*01 | Brown Swiss | U73188 | ||
| 5 | TRGV5S1 | (F) | V5S1*01 | Holstein | D13653 | ||
| TRGV5S2 | (F) | V5S2*01 | Holstein | D16121 | |||
| TRGV5S3 | (F) | V5S3*01 | Holstein | D16122 | |||
| TRGV5S4 | (F) | V5S4*01 | Holstein | D16125 | |||
| TRGV5S5 | (F) | V5S5*01 | Holstein | D16128 | |||
| TRGV5S6 | (F) | V5S6*01 | Holstein | D16129 | |||
| TRGV5S7 | (F) | V5S7*01 | Holstein | D16130 | |||
| TRGV5S8 | (F) | V5S8*01 | Holstein | D13649 | |||
| TRGV5S9 | (F) | V5S9*01 | Holstein | D13652 | |||
| TRGV5S10 | (F) | V5S10*01 | Holstein | D16132 | |||
| TRGV5S11 | (F) | V5S11*01 | Holstein | D16126 | |||
| TRGV5S12 | (F) | V5S12*01 | Holstein | D16127 | |||
| TRGV5S13 | (F) | V5S13*01 | Holstein | D13651 | |||
| TRGV5S14 | (F) | V5S14*01 | Holstein | D13654 | |||
| TRGV5S15 | (F) | V5S15*01 | Holstein | D16120 | |||
| TRGV5S16 | (F) | V5S16*01 | Holstein | D16133 | |||
| TRGV5S17 | (F) | V5S17*01 | Holstein | D13650 | |||
| TRGV5S18 | (F) | V5S18*01 | Holstein | D16117 | |||
| TRGV5S19 | (F) | V5S19*01 | Holstein | D16118 | |||
| TRGV5S20 | (F) | V5S20*01 | Holstein | D16124 |
Created: Wednesday, 29-Jun-2011 17:06:04 CEST
Author: Elodie Foulquier
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
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IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr |
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Citing IMGT © Copyright 1995-2012 IMGT®, the international ImMunoGeneTics information system® |
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