Table of alleles: Torafugu (Takifugu rubripes) TRAV

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

The IMGT allele table refers to the V-REGION polymorphism. It does not include polymorphisms in the other parts of the V-GENE. V-REGION alleles are only described for genes which have at least one Functional or ORF allele. The accession number of a reference sequence is given for each allele.
Nucleotide mutations and amino acid changes in CDR3-IMGT of rearranged sequences are not taken into account for the description of polymorphism.

Click on a gene name to get the alignment of the corresponding V-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

TRAV
subgroup
TRAV
gene name
Fct TRAV
allele name
Accession
number
Confirmed
by genetics
and/or data
Description of mutations
TRAV1 TRAV1S1 F TRAV1S1*01 AF110525 +  
TRAV1S2 F TRAV1S2*01 AF110525 +  
TRAV1S3 F TRAV1S3*01 AF110526 +  
TRAV1S4 F TRAV1S4*01 AF110526 +  
TRAV1S5 F TRAV1S5*01 AF110526 +  
TRAV1S6 F TRAV1S6*01 AF269200    
TRAV1S7 (F) TRAV1S7*01 AF269222    
TRAV2 TRAV2S1 F TRAV2S1*01 AF269201    
TRAV2S2 F TRAV2S2*01 AF269202    
TRAV2S3 F TRAV2S3*01 AF269203    
TRAV3 TRAV3S1 F TRAV3S1*01 AF110525 +  
TRAV3S2 F TRAV3S2*01 AF110526 +  
TRAV3S3 F TRAV3S3*01 AF110526 +  
TRAV3S4 F TRAV3S4*01 AF269207    
TRAV3S5 F TRAV3S5*01 AF269208    
TRAV4 TRAV4S1 F TRAV4S1*01 AF110525 +  
TRAV4S2 F TRAV4S2*01 AF110526 +  
TRAV4S3 F TRAV4S3*01 AF110526 +  


Created: 01/07/2003
Author: Nathalie Bosc

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For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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