Table of alleles: Goat (Capra hircus) TRAV

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

The IMGT allele table refers to the V-REGION polymorphism. It does not include polymorphisms in the other parts of the V-GENE. V-REGION alleles are only described for genes which have at least one Functional or ORF allele. The accession number of a reference sequence is given for each allele.
Nucleotide mutations and amino acid changes in CDR3-IMGT of rearranged sequences are not taken into account for the description of polymorphism.

Click on a gene name to get the alignment of the corresponding V-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

TRAV
subgroup
TRAV
gene name
Fct TRAV
allele name
Accession
number
Confirmed
by genetics
and/or data
Description of mutations
1 1S1 (F) V1S1*01 AF318539    
1S2 (F) V1S2*01 AF318517    
1S3 (F) V1S3*01 AF318520    
1S4 (F) V1S4*01 AF318532    
1S5 (F) V1S5*01 AF318545    
1S6 (F) V1S6*01 AF318535    
1S7 (F) V1S7*01 AF318530    
2 2S1 (F) V2S1*01 AF318510    
2S2 (F) V2S2*01 AF318540    
2S3 (F) V2S3*01 AF318521    
3 3S1 (F) V3S1*01 AF318526    
4 4S1 (F) V4S1*01 AF318518    
4S2 (F) V4S2*01 AF318544    
5 5S1 (F) V5S1*01 AF318519    
5S2 (F) V5S2*01 AF318538    
5S3 (F) V5S3*01 AF318509    
5S4 (F) V5S4*01 AF318514    
6 6S1 (F) V6S1*01 AF318527    
6S2 (F) V6S2*01 AF318534    
7 7S1 (F) V7S1*01 AF318528    
8 8S1 (F) V8S1*01 AF318531    
8S2 (F) V8S2*01 AF318537    
9 9S1 (F) V9S1*01 AF318515    
10 10S1 (F) V10S1*01 AF318543    
10S2 (F) V10S2*01 AF318529    
11 11S1 (F) V11S1*01 AF318524    
12 12S1 (F) V12S1*01 AF318547    
13 13S1 (F) V13S1*01 AF318513    
14 14S1 (F) V14S1*01 AF318546    
15 15S1 (F) V15S1*01 AF318523    
16 16S1 (F) V16S1*01 AF318522    
16S2 (F) V16S2*01 AF318533    
16S3 (F) V16S3*01 AF318541    
17 17S1 (F) V17S1*01 AF318542    
17S3 (F) V17S3*01 AF318516    
17S4 (F) V17S4*01 AF318536    
18 18S1 (F) V18S1*01 AF318512    
19 19S1 (F) V19S1*01 AF318511    


Created: 26/09/2002
Author: Géraldine Folch

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