Click on a
gene name to get the alignment of the corresponding C-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).
Functionality is shown between parentheses, (F) and (P), when the accession number refers to a cDNA sequence and the corresponding genomic gene has not yet been isolated.
Norway rat (Rattus norvegicus)
| IGHC gene name |
Exons | Fct | IGHC allele name |
Accession numbers | Confirmed by genetics and/or data |
Description of mutations |
| IGHA | CH1 | |||||
| H+CH2 | ||||||
| CH3(including CH-S) | F | IGHA*01 | M13801 | |||
| M | ||||||
| IGHE | CH1 | F | IGHE*01 | K02901 | + | |
| CH2 | F | IGHE*01 | K02901 | + | ||
| CH3 | F | IGHE*01 | K02901 | + | ||
| CH4(including CH-S) | F | IGHE*01 | K02901 | + | ||
| M1 | F | IGHE*01 | K02901 | |||
| M2 | F | IGHE*01 | K02901 | |||
| IGHG1 | CH1 | F | IGHG1*01 | M28670 | ||
| H | F | IGHG1*01 | M28670 | |||
| CH2 | F | IGHG1*01 | M28670 | |||
| CH3(including CH-S) | F | IGHG1*01 | M28670 | + | ||
| IGHG2A | CH1 | F | IGHG2A*01 | M28669 | ||
| H | F | IGHG2A*01 | M28669 | |||
| CH2 | F | IGHG2A*01 | M28669 | |||
| CH3(including CH-S) | F | IGHG2A*01 | M28669 | + | ||
| IGHG2B | CH1 | F | IGHG2B*01 | M28671 | ||
| H | F | IGHG2B*01 | M28671 | |||
| CH2 | F | IGHG2B*01 | M28671 | |||
| CH3(including CH-S) | F | IGHG2B*01 | M28671 | + | ||
| IGHM | CH1 | (F) | IGHM*01 | X68782 | ||
| CH2 | (F) | IGHM*01 | X68312 | + | t350 ,F117 |g353 ,W118 | | |
| F | IGHM*02 | M13800 | t350>g,F117>C|g353>t,W118>L| | |||
| CH3 | (F) | IGHM*01 | X68312 | |||
| CH4(including CH-S) | (F) | IGHM*01 | X68312 |
Black rat (Rattus rattus)
| IGHC gene name |
Exons | Fct | IGHC allele name |
Accession numbers | Confirmed by genetics and/or data |
Description of mutations |
| IGHG2C | CH1 | (F) | IGHG2C*01 | X07189 | ||
| H | (F) | IGHG2C*01 | X07189 | |||
| CH2 | (F) | IGHG2C*01 | X07189 | |||
| CH3(including CH-S) | (F) | IGHG2C*01 | X07189 |
Created: 22/10/2002
Last updated: Monday, 11-Jul-2011 12:57:00 CEST
Author: Nathalie Bosc
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
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IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr |
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Citing IMGT © Copyright 1995-2012 IMGT®, the international ImMunoGeneTics information system® |
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