IMGT Repertoire (MH)

Colliers de Perles G-DOMAIN

MHC-I

MHC-Ia-Alpha

• Axolotl: AMME-IA [D1,D2]
• Human: HLA-A [D1,D2], HLA-B [D1,D2], HLA-C [D1,D2]
• Mouse: H2-D1 [D1,D2], H2-K1 [D1,D2], H2-L [D1,D2]
• Norway rat: RT1-A [D1,D2]
• Teleostei:
  - Oncorhynchus kisutch: MH1-A (UA) [D1,D2]
  - Oncorhynchus mykiss (Oncmyk): MH1-A (UBA) [D1,D2]
  - Salmon trutta: MH1-A (UB) [D1,D2]

MHC-Ib-Alpha

• Human: HLA-E [D1,D2], HLA-F [D1,D2], HLA-G [D1,D2]
• Mouse: H2-M5 [D1,D2], H2-Q7 [D1,D2], H2-T3 [D1,D2]
• Teleostei: Oncorhynchus mykiss (Oncmyk): MH1-B (UAA), MH1-E (UEA), MH1-G (UGA) [D1,D2]

MHC-II

MHC-IIa-Alpha

• Human: HLA-DPA1 [D1], HLA-DQA1 [D1], HLA-DRA [D1]
• Mouse: H2-AA [D1], H2-EA [D1]
• Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DA (DAA) [D1]

MHC-IIb-Alpha

• Human: HLA-DMA [D1], HLA-DOA [D1]
• Mouse: H2-DMA [D1], H2-DOA [D1]

MHC-IIa-Beta

• Human: HLA-DPB1 [D1], HLA-DQB1 [D1], HLA-DRB1 [D1]
• Mouse: H2-AB [D1], H2-EB1 [D1]
• Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DB1 (DAB) [D1]

MHC-IIb-Beta

• Human: HLA-DMB1 [D1], HLA-DOB [D1]
• Mouse: H2-DMB1 [D1], H2-DOB [D1]

Colliers de Perles C-LIKE-DOMAIN

MHC-I

MHC-Ia-Alpha

• Human: HLA-A [D3], HLA-B [D3], HLA-Cw [D3]
• Mouse: H2-D1 [D3], H2-K1 [D3], H2-L [D3]
• Teleostei: Oncorhynchus mykiss (Oncmyk): MH1-A (UBA) [D3]

MHC-Ib-Alpha

• Human: HLA-E [D3], HLA-F [D3], HLA-G [D3]
• Mouse: H2-M5 [D3], H2-Q7 [D3], H2-T3 [D3]
• Teleostei: Oncorhynchus mykiss (Oncmyk): MH1-B (UAA) [D3], MH1-C (UCA) [D3], MH1-E (UEA) [D3], MH1-G (UGA) [D3]

Beta2-Microglobulin

• Human: B2M
• Mouse: B2M

MHC-II

MHC-IIa-Alpha

• Human: HLA-DQA1 [D2], HLA-DRA [D2]
• Mouse: H2-AA [D2], H2-EA [D2]
• Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DA (DAA) [D2]

MHC-IIb-Alpha

• Human: HLA-DMA [D2], HLA-DOA [D2]
• Mouse: H2-DMA [D2]

MHC-IIa-Beta

• Human: HLA-DPB1 [D2], HLA-DQB1 [D2], HLA-DRB1 [D2]
• Mouse: H2-AB [D2], H2-EB [D2]
• Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DB1 (DAB) [D2], MH2-DB2 (DBB) [D2]

MHC-IIb-Beta

• Human: HLA-DMB [D2], HLA-DOB [D2]

3D representation

C-LIKE-DOMAIN

Beta2-Microglobulin

• Human: B2M

MHC-II-Alpha

• Human: HLA-DMA [D2]

MHC-II-Beta

• Human: HLA-DMB [D2]

Strand and loop lengths

MHC-I

MHC-Ia-Alpha

• G-ALPHA1 [D1]:
  - Axolotl: AMME-IA
  - Human: HLA-A, HLA-B, HLA-C
  - Mouse: H2-D1, H2-K1, H2-L
  - Norway rat: RT1-A
  - Teleostei: Oncorhynchus kisutch MH1-A (UA), Oncorhynchus mykiss MH1-A (UBA), Salmon trutta MH1-A (UB)
• G-ALPHA2 [D2]:
  - Axolotl: AMME-IA
  - Human: HLA-A, HLA-B, HLA-Cw
  - Mouse: H2-D1, H2-K1, H2-L
  - Norway rat: RT1-A
  - Teleostei: Oncorhynchus kisutch MH1-A (UA), Oncorhynchus mykiss MH1-A (UBA), Salmon trutta MH1-A (UB)
• C-LIKE-DOMAIN [D3]:
  - Human: HLA-A, HLA-B, HLA-C
  - Mouse: H2-D1, H2-K1, H2-L
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH1-A (UBA)

MHC-Ib-Alpha

• G-ALPHA1 [D1]:
  - Human: HLA-E, HLA-F, HLA-G
  - Mouse: H2-M5, H2-Q7, H2-T3
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH1-B (UAA), MH1-E (UEA)
• G-ALPHA2 [D2]:
  - Human: HLA-E, HLA-F, HLA-G
  - Mouse: H2-M5, H2-Q7, H2-T3
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH1-B (UAA), MH1-C (UCA), MH1-E (UEA), MH1-G (UGA)
• C-LIKE-DOMAIN [D3]:
  - Human: HLA-E, HLA-F, HLA-G
  - Mouse: H2-M5, H2-Q7, H2-T3
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH1-B (UAA), MH1-C (UCA), MH1-E (UEA), MH1-G (UGA)

Beta2-Microglobuline

• C-LIKE-DOMAIN:
  - Human: B2M
  - Mouse: B2M

MHC-II

MHC-IIa-Alpha

• G-ALPHA [D1]:
  - Human: HLA-DPA1, HLA-DQA1, HLA-DRA
  - Mouse: H2-AA, H2-EA
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DA (DAA)
• C-LIKE-DOMAIN [D2]:
  - Human: HLA-DPA1, HLA-DQA1, HLA-DRA
  - Mouse: H2-AA, H2-EA
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DA (DAA)

MHC-IIb-Alpha

• G-ALPHA [D1]:
  - Human: HLA-DMA, HLA-DOA
  - Mouse: H2-DMA, H2-DMO
• C-LIKE-DOMAIN [D2]:
  - Human: HLA-DMA, HLA-DOA
  - Mouse: H2-DMA

MHC-IIa-Beta

• G-BETA [D1]:
  - Human: HLA-DPB1, HLA-DQB1, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5
  - Mouse: H2-AB, H2-EB
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DB1 (DAB), MH2-DB2 (DBB)
• C-LIKE-DOMAIN [D2]:
  - Human: HLA-DPB1, HLA-DQB1, HLA-DRB1
  - Mouse: H2-AB, H2-EB
  - Teleostei: Oncorhynchus mykiss (Oncmyk): MH2-DB1 (DAB), MH2-DB2 (DBB)

MHC-IIb-Beta

• G-BETA [D1]:
  - Human: HLA-DMB HLA-DOB
  - Mouse: H2-DMB, H2-DOB
• C-LIKE-DOMAIN [D2]:
  - Human: HLA-DMB HLA-DOB