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Other CD1 entries

IMGT RPI entry from gene to protein for Homo sapiens CD1B

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

CD1B Gene exon/intron organization

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Number of alleles: 3

IMGT reference alleles

Allele name Gene functionality IMGT reference sequences
Clone names Accession numbers Molecule type
CD1B*01 F RP11-101J8 AL121986 gDNA
CD1B*02 F lambda-R1L5 M22168 gDNA (EX1)
M22169 gDNA (EX2)
M22170 gDNA (EX3)
M22171 gDNA (EX4)
M22172 gDNA (EX5)
M22173 gDNA (EX6)
CD1B*03 F AF142666 gDNA (1)

IMGT reference sequences (in FASTA format) for the allele(s): CD1B*01 to CD1B*03

Other sequences from the literature

Allele name Gene functionality reference sequences
Clone names Accession numbers Molecule type
CD1B*01 F M28826 cDNA

Corresponding protein database accession numbers

Allele name Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
CD1B*01 AL121986 Sw: P29016 333 aa
M28826
NM_001764 NP_001755 333 aa
CD1B*02 M22168 to M22173 Sw: P06126 333 aa
CD1B*03 AF142666 (1) Sw: P06126 99 aa (1)
IMGT notes:
  1. (1) partial cds, only EX2

Genomic sequence

Positions: 17860...14678 (from ATG to stop codon included).

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

CD1B*01: AL121986(g)

Nucleotide sequence

1        atgctgctgc tgccatttca actgttagct gttctctttc ctggtggtaa cagtgaacat

61       gccttccagg ggccgacctc ctttcatgtt atccagacct cgtcctttac caatagtacc

121      tgggcacaaa ctcaaggctc aggctggttg gatgatttgc agattcatgg ctgggatagc

181      gactcaggca ctgccatatt cctgaagcct tggtctaaag gtaactttag tgataaggag

241      gttgctgagt tagaggagat attccgagtc tacatctttg gattcgctcg agaagtacaa

301      gactttgccg gtgatttcca gatgaaatac ccctttgaga tccagggcat agcaggctgt

361      gagctacatt ctggaggtgc catagtaagc ttcctgaggg gagctctagg aggattggat

421      ttcctgagtg tcaagaatgc ttcatgtgtg ccttccccag aaggtggcag cagggcacag

481      aaattctgtg cactaatcat acaatatcaa ggtatcatgg aaactgtgag aattctcctc

541      tatgaaacct gcccccgata tctcttgggc gtcctcaatg caggaaaagc agatctgcaa

601      agacaagtga agcctgaggc ctggctgtcc agtggcccca gtcctggacc tggccgtctg

661      cagcttgtgt gccatgtctc aggattctac ccaaagcccg tgtgggtgat gtggatgcgg

721      ggtgagcagg agcagcaggg cactcagcta ggggacatcc tgcccaatgc taactggaca

781      tggtatctcc gagcaaccct ggatgtggca gatggggagg cggctggcct gtcctgtcgg

841      gtgaagcaca gcagtttaga gggccaggac atcatcctct actggagaaa ccccacctcc

901      attggctcaa ttgttttggc aataatagtg ccttccttgc tccttttgct atgccttgca

961      ttatggtata tgaggcgccg gtcatatcag aatatcccat ga
Nucleotide sequence in FASTA format (without gaps) CD1B*01

Amino acid sequence

1        MLLLPFQLLA VLFPGGNSEH AFQGPTSFHV IQTSSFTNST WAQTQGSGWL DDLQIHGWDS

61       DSGTAIFLKP WSKGNFSDKE VAELEEIFRV YIFGFAREVQ DFAGDFQMKY PFEIQGIAGC

121      ELHSGGAIVS FLRGALGGLD FLSVKNASCV PSPEGGSRAQ KFCALIIQYQ GIMETVRILL

181      YETCPRYLLG VLNAGKADLQ RQVKPEAWLS SGPSPGPGRL QLVCHVSGFY PKPVWVMWMR

241      GEQEQQGTQL GDILPNANWT WYLRATLDVA DGEAAGLSCR VKHSSLEGQD IILYWRNPTS

301      IGSIVLAIIV PSLLLLLCLA LWYMRRRSYQ NIP*
Amino acid sequence in FASTA format (without gap) CD1B*01

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