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Other CD1 entries

IMGT RPI entry from gene to protein for Homo sapiens CD1D

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

CD1D Gene exon/intron organization

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Gene table (Locus and genes)

Corresponding protein database accession numbers

Allele names IMGT/LIGM-DB UniProt Protein isoform
Accession numbers Sequence lengths (nt) Accession numbers Sequence lengths (AA)
CD1D*01 AL138899 1005 P15813 335
X14974 P15813 335
L38815 to L38820 P15813 352
J04142 P15813 335
BC027926 P15813 335
AP002532 P15813 335
AK225996 726 242
CD1D*02 AF142668 266 P15813 88
CD1D*03 KF742502 213 70
CD1D*04 KF751734 213 70

Genomic sequence

Position (2): 19674 ... 19990 (ATG and EX1), 1 ... 2792 (EX2 to stop codon included) (2).

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

CD1C*01: AL138899(g)

Nucleotide sequence

1        atggggtgcc tgctgtttct gctgctctgg gcgctcctcc aggcttgggg aagcgctgaa

61       gtcccgcaaa ggcttttccc cctccgctgc ctccagatct cgtccttcgc caatagcagc

121      tggacgcgca ccgacggctt ggcgtggctg ggggagctgc agacgcacag ctggagcaac

181      gactcggaca ccgtccgctc tctgaagcct tggtcccagg gcacgttcag cgaccagcag

241      tgggagacgc tgcagcatat atttcgggtt tatcgaagca gcttcaccag ggacgtgaag

301      gaattcgcca aaatgctacg cttatcctat cccttggagc tccaggtgtc cgctggctgt

361      gaggtgcacc ctgggaacgc ctcaaataac ttcttccatg tagcatttca aggaaaagat

421      atcctgagtt tccaaggaac ttcttgggag ccaacccaag aggccccact ttgggtaaac

481      ttggccattc aagtgctcaa ccaggacaag tggacgaggg aaacagtgca gtggctcctt

541      aatggcacct gcccccaatt tgtcagtggc ctccttgagt cagggaagtc ggaactgaag

601      aagcaagtga agcccaaggc ctggctgtcc cgtggcccca gtcctggccc tggccgtctg

661      ctgctggtgt gccatgtctc aggattctac ccaaagcctg tatgggtgaa gtggatgcgg

721      ggtgagcagg agcagcaggg cactcagcca ggggacatcc tgcccaatgc tgacgagaca

781      tggtatctcc gagcaaccct ggatgtggtg gctggggagg cagctggcct gtcctgtcgg

841      gtgaagcaca gcagtctaga gggccaggac atcgtcctct actggggtgg gagctacacc

901      tccatgggct tgattgcctt ggcagtcctg gcgtgcttgc tgttcctcct cattgtgggc

961      tttacctccc ggtttaagag gcaaacttcc tatcagggcg tcctgtga
Nucleotide sequence in FASTA format (without gaps) CD1D*01

Amino acid sequence

1        MGCLLFLLLW ALLQAWGSAE VPQRLFPLRC LQISSFANSS WTRTDGLAWL GELQTHSWSN

61       DSDTVRSLKP WSQGTFSDQQ WETLQHIFRV YRSSFTRDVK EFAKMLRLSY PLELQVSAGC

121      EVHPGNASNN FFHVAFQGKD ILSFQGTSWE PTQEAPLWVN LAIQVLNQDK WTRETVQWLL

181      NGTCPQFVSG LLESGKSELK KQVKPKAWLS RGPSPGPGRL LLVCHVSGFY PKPVWVKWMR

241      GEQEQQGTQP GDILPNADET WYLRATLDVV AGEAAGLSCR VKHSSLEGQD IVLYWGGSYT

301      SMGLIALAVL ACLLFLLIVG FTSRFKRQTS YQGVL*
Amino acid sequence in FASTA format (without gap) CD1D*01

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