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Other CD1 entries

IMGT RPI entry from gene to protein for Homo sapiens CD1E

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

Number of alleles: 6

IMGT reference alleles

Allele name Gene functionality IMGT reference sequences
Clone names Accession numbers Molecule type
CD1E*01 F AL121986 gDNA
CD1E*02 F AF142669 gDNA (1)
CD1E*03 F AH010757 gDNA (2)
CD1E*04 F vAH010758 gDNA (2)
CD1E*05 F AJ251334 gDNA (3)
CD1E*06 F AJ251335 gDNA (3)

IMGT reference sequences (in FASTA format) for the allele(s): CD1E*01 to CD1E*06

Other sequences from the literature

Allele name Gene functionality IMGT reference sequences
Clone names Accession numbers Molecule type
CD1E*01 F D-PLL-lambda 2001 X14975 gDNA

Corresponding protein database accession numbers

Allele name Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
CD1E*01 AL121986 Sw: P15812 322 aa
X14975 322 aa
NM_030893 NP_112155 322 aa
CD1E*02 AF142669 (1) 91 aa
CD1E*03 AH010757 (2) 178 aa
CD1E*04 AH010757 (2) 178 aa
CD1E*05 AJ251334 (3) 98 aa
CD1E*06 AJ251335 (3) 90 aa
IMGT notes:
  1. (1) partial cds, only EX2
  2. (2) partial cds, only EX2 and EX3
  3. (3) partial cds, only EX3

Genomic sequence

Position: 100404 ... 103010 (from ATG to stop codon included).

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

CD1E*01: AL121986(g)

Nucleotide sequence

1        atgctgctcc tgttcctcct cttcgagggt ctctgctgtc ctggggaaaa tacagcagca

61       gcagaggagc agctgtcctt ccgcatgctc caaacttcct cctttgccaa ccacagctgg

121      gcacacagtg agggctcagg atggctgggt gacctgcaga ctcatggctg ggacactgtc

181      ttgggcacca tccgctttct gaagccctgg tcccatggaa acttcagcaa gcaggagctg

241      aaaaacttac agtcactgtt ccagttatac ttccatagtt ttatccagat agtgcaagct

301      tctgctggtc aatttcagct tgaatacccc ttcgagatcc agatattagc tggctgtaga

361      atgaatgccc cacaaatctt cttaaatatg gcatatcaag ggtcagattt cctgagtttc

421      caaggaattt cctgggagcc atctccagga gcagggatcc gggcccagaa catctgtaaa

481      gtgctcaatc gctacctaga tattaaggaa atactgcaaa gccttcttgg tcacacctgc

541      cctcgatttc tagcggggct catggaagca ggggagtcag aactgaaacg gaaagtgaag

601      ccagaggcct ggctgtcctg tggccccagt cctggccctg gccgtctgca gcttgtgtgc

661      catgtctcag gattctaccc aaagcccgtg tgggtgatgt ggatgcgggg tgagcaggag

721      cagcggggca ctcagcgagg ggacgtcctg cctaatgctg acgagacatg gtatctccga

781      gcaaccctgg atgtggcggc tggggaggca gctggcctgt cctgtcgggt gaaacacagc

841      agtctagggg gccatgatct aatcatccat tggggtggat attccatctt tctcatcctg

901      atctgtttga ctgtgatagt taccctggtc atattggttg tagttgactc acggttaaaa

961      aaacagaggt ga
Nucleotide sequence in FASTA format (without gaps) CD1E*01

Amino acid sequence

1        MLLLFLLFEG LCCPGENTAA AEEQLSFRML QTSSFANHSW AHSEGSGWLG DLQTHGWDTV

61       LGTIRFLKPW SHGNFSKQEL KNLQSLFQLY FHSFIQIVQA SAGQFQLEYP FEIQILAGCR

121      MNAPQIFLNM AYQGSDFLSF QGISWEPSPG AGIRAQNICK VLNRYLDIKE ILQSLLGHTC

181      PRFLAGLMEA GESELKRKVK PEAWLSCGPS PGPGRLQLVC HVSGFYPKPV WVMWMRGEQE

241      QRGTQRGDVL PNADETWYLR ATLDVAAGEA AGLSCRVKHS SLGGHDLIIH WGGYSIFLIL

301      ICLTVIVTLV ILVVVDSRLK KQR*
Amino acid sequence in FASTA format (without gap) CD1E*01

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