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Other CD2 Family entries

IMGT RPI entry from gene to protein for Homo sapiens CD244

Citing IMGT RPI entry for CD244

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

CD244 Gene exon/intron organization

Legend:

Number of alleles: 2

IMGT reference alleles

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
CD244*01 F EX1-9 AF242540[1] cDNA
CD244*02 F EX1-9 AF105261[2] cDNA (1)splicing B

IMGT reference sequences (in FASTA format) for the allele(s): CD244*01 to CD244*02

Other sequences from the literature

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
CD244*02 F EX1-9 AL354714 cDNA
AF107761 cDNA
AF117711 cDNA
AJ245375 cDNA
AF145782 cDNA
BC053985 cDNA
BC028073 cDNA
NM_016382 cDNA
EX1-7,10 AJ245377 cDNA (2) splicing C
EX1-2,4-9 AJ245376 cDNA (3) splicing D

Corresponding protein database accession numbers

CD244 Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
CD244*01 AF105261 Q9BZW8 365 aa 1
AL354714 Q5VYI2 365 aa 2
AJ245377 Q5VYI5 329 aa 3
AJ245376 Q5VYI6 273 aa 4
AF363452 106 aa 5
NM_016382 NP_057466 365 aa 1
CD244*02 AF242540 Q9BZW8 370 aa 1
IMGT notes:
  1. (1) Splicing B (365 aa). Internal alternative splicing within EX3. 15 nt away from 5' splice site. In EX3 [D2] 360t>c, numbering according to IMGT unique numbering for C-DOMAIN and C-LIKE-DOMAIN.
  2. (2) Splicing C (329 aa). No EX8 and EX9. Utilize a novel exon (EX10) of 9 codons.
  3. (3) Splicing D (273 aa). No EX3.
IMGT references:
  1. [1] Nakajima H. et al., Eur. J. Immunol. 29, 1676-1683 (1999). PMID: 10359122
  2. [2] Kumaresan P.R. and Mathew P.A., Immunogenetics 51, 987-992 (2000). PMID: 11003394
  3. [3] Parolini and al., J. Exp. Med. 192, 337-346 (2000). PMID: 10934222

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

CD244*01: AF242540(c)

Nucleotide sequence

1        atgctggggc aagtggtcac cctcatactc ctcctgctcc tcaaggtgta tcagggcaaa

61       ggatgccagg gatcagctga ccatgtggtt agcatctcgg gagtgcctct tcagttacaa

121      ccaaacagca tacagacgaa ggttgacagc attgcatgga agaagttgct gccctcacaa

181      aatggatttc atcacatatt gaagtgggag aatggctctt tgccttccaa tacttccaat

241      gatagattca gttttatagt caagaacttg agtcttctca tcaaggcagc tcagcagcag

301      gacagtggcc tctactgcct ggaggtcacc agtatatctg gaaaagttca gacagccacg

361      ttccaggttt ttgtatttga taaagttgag aaaccccgcc tacaggggca ggggaagatc

421      ctggacagag ggagatgcca agtggctctg tcttgcttgg tctccaggga tggcaatgtg

481      tcctatgctt ggtacagagg gagcaagctg atccagacag cagggaacct cacctacctg

541      gacgaggagg ttgacattaa tggcactcac acatatacct gcaatgtcag caatcctgtt

601      agctgggaaa gccacaccct gaatctcact caggactgtc agaatgccca tcaggaattc

661      agattttggc cgtttttggt gatcatcgtg attctaagcg cactgttcct tggcaccctt

721      gcctgcttct gtgtgtggag gagaaagagg aaggagaagc agtcagagac cagtcccaag

781      gaatttttga caatttacga agatgtcaag gatctgaaaa ccaggagaaa tcacgagcag

841      gagcagactt ttcctggagg ggggagcacc atctactcta tgatccagtc ccagtcttct

901      gctcccacgt cacaagaacc tgcatataca ttatattcat taattcagcc ttccaggaag

961      tctggatcca ggaagaggaa ccacagccct tccttcaata gcactatcta tgaagtgatt

1021     ggaaagagtc aacctaaagc ccagaaccct gctcgattga gccgcaaaga gctggagaac

1081     tttgatgttt attcctag
Nucleotide sequence in FASTA format (without gaps) CD244*01

Amino acid sequence

1        MLGQVVTLIL LLLLKVYQGK GCQGSADHVV SISGVPLQLQ PNSIQTKVDS IAWKKLLPSQ

61       NGFHHILKWE NGSLPSNTSN DRFSFIVKNL SLLIKAAQQQ DSGLYCLEVT SISGKVQTAT

121      FQVFVFDKVE KPRLQGQGKI LDRGRCQVAL SCLVSRDGNV SYAWYRGSKL IQTAGNLTYL

181      DEEVDINGTH TYTCNVSNPV SWESHTLNLT QDCQNAHQEF RFWPFLVIIV ILSALFLGTL

241      ACFCVWRRKR KEKQSETSPK EFLTIYEDVK DLKTRRNHEQ EQTFPGGGST IYSMIQSQSS

301      APTSQEPAYT LYSLIQPSRK SGSRKRNHSP SFNSTIYEVI GKSQPKAQNP ARLSRKELEN

361      FDVYS*
Amino acid sequence in FASTA format (without gap) CD244*01

Legend: