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IMGT RPI entry from gene to protein for Homo sapiens FCER1A

Citing IMGT RPI entry for FCER1A

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

FCER1A Gene exon/intron organization

Legend:

Number of alleles: 2

IMGT reference alleles

Allele name Gene functionality IMGT reference sequences
Clone names Accession numbers Molecule type
FCER1A*01 F X06948 cDNA
FCER1A*02 F BC015195 cDNA

IMGT reference sequences (in FASTA format) for the allele(s): FCER1A*01 to FCER1A*02

Other sequences from the literature

Allele name Gene functionality IMGT reference sequences
Clone names Accession numbers Molecule type
FCER1A*01 F J03605 cDNA
BC005912 cDNA

Corresponding protein database accession numbers

Allele name Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
FCER1A*01 NM_002001 NP_001992 257 aa
X06948 P12319 257 aa

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

FCER1A*01: X06948(c)

Nucleotide sequence

1        atggctcctg ccatggaatc ccctactcta ctgtgtgtag ccttactgtt cttcgctcca

61       gatggcgtgt tagcagtccc tcagaaacct aaggtctcct tgaaccctcc atggaataga

121      atatttaaag gagagaatgt gactcttaca tgtaatggga acaatttctt tgaagtcagt

181      tccaccaaat ggttccacaa tggcagcctt tcagaagaga caaattcaag tttgaatatt

241      gtgaatgcca aatttgaaga cagtggagaa tacaaatgtc agcaccaaca agttaatgag

301      agtgaacctg tgtacctgga agtcttcagt gactggctgc tccttcaggc ctctgctgag

361      gtggtgatgg agggccagcc cctcttcctc aggtgccatg gttggaggaa ctgggatgtg

421      tacaaggtga tctattataa ggatggtgaa gctctcaagt actggtatga gaaccacaac

481      atctccatta caaatgccac agttgaagac agtggaacct actactgtac gggcaaagtg

541      tggcagctgg actatgagtc tgagcccctc aacattactg taataaaagc tccgcgtgag

601      aagtactggc tacaattttt tatcccattg ttggtggtga ttctgtttgc tgtggacaca

661      ggattattta tctcaactca gcagcaggtc acatttctct tgaagattaa gagaaccagg

721      aaaggcttca gacttctgaa cccacatcct aagccaaacc ccaaaaacaa ctga
Nucleotide sequence in FASTA format (without gaps) FCER1A*01

Amino acid sequence

1        MAPAMESPTL LCVALLFFAP DGVLAVPQKP KVSLNPPWNR IFKGENVTLT CNGNNFFEVS

61       STKWFHNGSL SEETNSSLNI VNAKFEDSGE YKCQHQQVNE SEPVYLEVFS DWLLLQASAE

121      VVMEGQPLFL RCHGWRNWDV YKVIYYKDGE ALKYWYENHN ISITNATVED SGTYYCTGKV

181      WQLDYESEPL NITVIKAPRE KYWLQFFIPL LVVILFAVDT GLFISTQQQV TFLLKIKRTR

241      KGFRLLNPHP KPNPKNN*
Amino acid sequence in FASTA format (without gap) FCER1A*01

Legend: