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Other CD3 entries

IMGT RPI entry from gene to protein for Mus musculus CD3E

Citing IMGT RPI entry for CD3E

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

CD3E Gene exon/intron organization

Legend:

Number of alleles: 1

IMGT reference alleles

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
CD3E*01 F EX1 M23370 gDNA
EX2 M23371 gDNA
EX3 M23372 gDNA
EX4 M23373 gDNA
EX5 M23374 gDNA
EX6 M23375 gDNA
EX7 M23376 gDNA

IMGT reference sequences (in FASTA format) for the allele(s): CD3E*01

Other sequences from the literature

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
CD3E*01 F EX1-7 J02990 cDNA
NM_007648 cDNA

Corresponding protein database accession numbers

CD3E Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
CD3E*01 M23370 P22646 189 aa 1
M23371 189 aa 1
M23372 189 aa 1
M23373 189 aa 1
M23374 189 aa 1
M23375 189 aa 1
M23376 189 aa 1
NM_007648 NP_031674 189 aa 1
IMGT references:
  1. [1] Clevers H. et all, Proc. Natl. Acad. Sci. U.S.A. 85, 8623-8627 (1988). PMID: 2973066

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

CD3E*01: M23370(g) M23371(g) M23372(g) M23373(g) M23374(g) M23375(g) M23376(g)

Nucleotide sequence

1        atgcggtgga acactttctg gggcatcctg tgcctcagcc tcctagctgt tggcacttgc

61       caggacgatg ccgagaacat tgaatacaaa gtctccatct caggaaccag tgtagagttg

121      acgtgccctc tagacagtga cgagaactta aaatgggaaa aaaatggcca agagctgcct

181      cagaagcatg ataagcacct ggtgctccag gatttctcgg aagtcgagga cagtggctac

241      tacgtctgct acacaccagc ctcaaataaa aacacgtact tgtacctgaa agctcgagtg

301      tgtgagtact gtgtggaggt ggacctgaca gcagtagcca taatcatcat tgttgacatc

361      tgtatcactc tgggcttgct gatggtcatt tattactgga gcaagaatag gaaggccaag

421      gccaagcctg tgacccgagg aaccggtgct ggtagcaggc ccagagggca aaacaaggag

481      cggccaccac ctgttcccaa cccagactat gagcccatcc gcaaaggcca gcgggacctg

541      tattctggcc tgaatcagag agcagtctga
Nucleotide sequence in FASTA format (without gaps) CD3E*01

Amino acid sequence

1        MRWNTFWGIL CLSLLAVGTC QDDAENIEYK VSISGTSVEL TCPLDSDENL KWEKNGQELP

61       QKHDKHLVLQ DFSEVEDSGY YVCYTPASNK NTYLYLKARV CEYCVEVDLT AVAIIIIVDI

121      CITLGLLMVI YYWSKNRKAK AKPVTRGTGA GSRPRGQNKE RPPPVPNPDY EPIRKGQRDL

181      YSGLNQRAV*
Amino acid sequence in FASTA format (without gap) CD3E*01

Legend: