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Other CD3 entries

IMGT RPI entry from gene to protein for Mus musculus CD3G

Citing IMGT RPI entry for CD3G

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

CD3G Gene exon/intron organization

Legend:

Number of alleles: 2

IMGT reference alleles

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
CD3G*01 F EX1 M18222 [1] gDNA
EX2 M18223 gDNA
EX3 M18224 gDNA
EX4 M18225 gDNA
EX5 M18226 gDNA
EX6 M18227 gDNA
CD3E*02 F EX1-EX6 M58149 [2] cDNA

IMGT reference sequences (in FASTA format) for the allele(s): CD3G*01 to CD3E*02

Other sequences from the literature

Allele names Gene functionality IMGT reference sequences
Clone names Exons Accession numbers Molecule type
CD3G*01 F EX1-6 Y00635 cDNA
EX1-6 X04145
MGC:51948 EX1-6 BC049847
EX1-6 NM_009850

Corresponding protein database accession numbers

Allele names Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
CD3G*01 M18222 P11942 182 aa 1
M18223 182 aa 1
M18224 182 aa 1
M18225 182 aa 1
M18226 182 aa 1
M18227 182 aa 1
NM_009850 NP_033980 182 aa 1
CD3G*02 M58149 182 aa 1
IMGT notes:
  1. (1) EX1 c42>g; 14I>M. In EX2[D] g351>a, positions according to the IMGT unique numbering for C-DOMAIN and C-LIKE DOMAIN.
IMGT references:
  1. [1] Saito, H. Koyama. et al, Proc. Natl. Acad. Sci. U.S.A. 84, 9131-9134 (1987) . PMID: 2827170
  2. [2] Krissansen, G.W. et all, J. Immunol. 138, 3513-3518 (1987). PMID: 2952720

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

CD3G*01: M18222(g) M18223(g) M18224(g) M18225(g) M18226(g) M18227(g)

Nucleotide sequence

1        atggagcaga ggaagggtct ggctggcctc ttcctggtga tctctcttct tcaaggcact

61       gtagcccaga caaataaagc aaagaatttg gtacaagtgg atggcagccg aggagacggt

121      tctgtacttc tgacttgtgg cttgactgac aagactatca agtggcttaa agacgggagc

181      ataataagtc ctctaaatgc aactaaaaac acatggaatc tgggcaacaa tgccaaagac

241      cctcgaggca cgtatcagtg tcaaggagca aaggagacgt caaaccccct gcaagtgtat

301      tacagaatgt gtgaaaactg cattgagcta aacataggca ccatatccgg ctttatcttc

361      gctgaggtca tcagcatctt cttccttgct cttggtgtat atctcattgc gggacaggat

421      ggagttcgcc agtcaagagc ttcagacaag cagactctgt tgcaaaatga acagctgtac

481      cagcccctca aggaccggga atatgaccag tacagccatc tccaaggaaa ccaactgagg

541      aagaagtga
Nucleotide sequence in FASTA format (without gaps) CD3G*01

Amino acid sequence

1        MEQRKGLAGL FLVISLLQGT VAQTNKAKNL VQVDGSRGDG SVLLTCGLTD KTIKWLKDGS

61       IISPLNATKN TWNLGNNAKD PRGTYQCQGA KETSNPLQVY YRMCENCIEL NIGTISGFIF

121      AEVISIFFLA LGVYLIAGQD GVRQSRASDK QTLLQNEQLY QPLKDREYDQ YSHLQGNQLR

181      KK*
Amino acid sequence in FASTA format (without gap) CD3G*01

Legend: