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Other CD79 entries

IMGT RPI entry from gene to protein for Mus musculus CD79A

Citing IMGT RPI entry for CD79A

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

CD79A Gene exon/intron organization

Legend:

Number of alleles: 1

IMGT reference alleles

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
CD79A*01 F EX1-5 M31773[1] gDNA

IMGT reference sequences (in FASTA format) for the allele(s): CD79A*01

Other sequences from the literature

Allele names Gene functionality Clone name Strain IMGT reference sequences
Exons Accession numbers Molecule type
CD79A*01 F EX1-5 X13450 cDNA
F420015N21 C57BL/6J EX1-5 AK143605 cDNA (1)
MGC:41188 C57BL/6J EX1-5 BC027633 cDNA
EX1-5 NM_007655 cDNA

Corresponding protein database accession numbers

Allele names Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
CD79A*01 M31773 P11911 220 aa 1
NM_007655 NP_031681 220 aa 1
IMGT notes:
  1. (1) In EX2[D] there is an insertion (291^292>ins^c) and deletion (g309>del#) (98TGACTG103>98HRGLYW103)which most probably result from sequencing error or typing error so this sequence is considered as a new allele.
IMGT references:
  1. [1] Kashiwamura S. et al., J. Immunol. 145, 337-343 (1990) . PMID: 2358676

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

CD79A*01: M31773(g)

Nucleotide sequence

1        atgccagggg gtctagaagc cctcagagcc ctgcctctcc tcctcttctt gtcatacgcc

61       tgtttgggtc ccggatgcca ggccctgcgg gtagaagggg gtccaccatc cctgacggtg

121      aacttgggcg aggaggcccg cctcacctgt gaaaacaatg gcaggaaccc taatatcaca

181      tggtggttca gccttcagtc taacatcaca tggcccccag tgccactggg tcctggccag

241      ggtaccacag gccagctgtt cttccccgaa gtaaacaaga acacaggggc ttgtactggg

301      tgccaagtga tagaaaacaa catattaaaa cgctcctgtg gtacttacct ccgcgtgcgc

361      aatccagtcc ctaggccctt cctggacatg ggggaaggta ccaagaaccg catcatcaca

421      gcagaaggga tcatcttgct gttctgtgca gtggtgccag ggacgctgct gctattcagg

481      aaacggtggc aaaatgagaa gtttggggtg gacatgccag atgactatga agatgaaaat

541      ctctatgagg gcctgaacct tgatgactgt tctatgtatg aggacatctc caggggactc

601      cagggcacct accaggatgt gggcaacctc cacattggag atgcccagct ggaaaagcca

661      tga
Nucleotide sequence in FASTA format (without gaps) CD79A*01

Amino acid sequence

1        MPGGLEALRA LPLLLFLSYA CLGPGCQALR VEGGPPSLTV NLGEEARLTC ENNGRNPNIT

61       WWFSLQSNIT WPPVPLGPGQ GTTGQLFFPE VNKNTGACTG CQVIENNILK RSCGTYLRVR

121      NPVPRPFLDM GEGTKNRIIT AEGIILLFCA VVPGTLLLFR KRWQNEKFGV DMPDDYEDEN

181      LYEGLNLDDC SMYEDISRGL QGTYQDVGNL HIGDAQLEKP *
Amino acid sequence in FASTA format (without gap) CD79A*01

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