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Other VSIG4 entries

IMGT RPI entry from gene to protein for Mus musculus VSIG4

Citing IMGT RPI entry for VSIG4

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

VSIG4 Gene exon/intron organization

Legend:

Number of alleles: 1

IMGT reference alleles

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
VSIG4*01 F EX1-7 AL831708 gDNA

IMGT reference sequences (in FASTA format) for the allele(s): VSIG4*01

Other sequences from the literature

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
VSIG4*01 F EX1-7 AK041014 cDNA
EX1-7 BC025105 cDNA
EX1-7 NM_177789 cDNA

Corresponding protein database accession numbers

Allele names Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
VSIG4*01 AL831708 Tr:Q80WA3 280 aa 1
NM_177789 NP_808457 280 aa 1
IMGT notes:
  1. (1) Mouse VSIG4 lack the sequence corresponding to the human C-LIKE-DOMAIN.

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

VSIG4*01: CQ789650(g)

Nucleotide sequence

1        atggagatct catcaggctt gctgttcctg ggccacctaa tagtgctcac ctatggccac

61       cccaccctaa aaacacctga gagtgtgaca gggacctgga aaggagatgt gaagattcag

121      tgcatctatg atcccctgag aggctacagg caagttttgg tgaaatggct ggtaagacac

181      ggctctgact ccgtcaccat cttcctacgt gactccactg gagaccatat ccagcaggca

241      aagtacagag gccgcctgaa agtgagccac aaagttccag gagatgtgtc cctccaaata

301      aataccctgc agatggatga caggaatcac tatacatgtg aggtcacctg gcagactcct

361      gatggaaacc aagtaataag agataagatc attgagctcc gtgttcggaa atataatcca

421      cctagaatca atactgaagc acctacaacc ctgcactcct ctttggaagc aacaactata

481      atgagttcaa cctctgactt gaccactaat gggactggaa aacttgagga gaccattgct

541      ggttcaggga ggaacctgcc aatctttgcc ataatcttca tcatctccct ttgctgcata

601      gtagctgtca ccatacctta tatcttgttc cgctgcagga cattccaaca agagtatgtc

661      tatggagtga gcagggtgtt tgccaggaag acaagcaact ctgaagaaac cacaagggtg

721      actaccatcg caactgatga accagattcc caggctctga ttagtgacta ctctgatgat

781      ccttgcctca gccaggagta ccaaataacc atcagatcaa caatgtctat tcctgcctgc

841      tga
Nucleotide sequence in FASTA format (without gaps) VSIG4*01

Amino acid sequence

1        MEISSGLLFL GHLIVLTYGH PTLKTPESVT GTWKGDVKIQ CIYDPLRGYR QVLVKWLVRH

61       GSDSVTIFLR DSTGDHIQQA KYRGRLKVSH KVPGDVSLQI NTLQMDDRNH YTCEVTWQTP

121      DGNQVIRDKI IELRVRKYNP PRINTEAPTT LHSSLEATTI MSSTSDLTTN GTGKLEETIA

181      GSGRNLPIFA IIFIISLCCI VAVTIPYILF RCRTFQQEYV YGVSRVFARK TSNSEETTRV

241      TTIATDEPDS QALISDYSDD PCLSQEYQIT IRSTMSIPAC *
Amino acid sequence in FASTA format (without gap) VSIG4*01

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