Part 1 - Norway rat (Rattus norvegicus) IGHC.
Click on the IMGT gene name to view IMGT Collier de Perles.
IMGT/LIGM-DB accession numbers or PDB codes are available in Protein displays.
Click here to see Norway rat (Rattus norvegicus) IGHC CH2
Click here to see Norway rat (Rattus norvegicus) IGHC CH3
Click here to see Norway rat (Rattus norvegicus) IGHC CH4
Click here to see Part 2 - Black rat (Rattus rattus) IGHC.
Part 1 - Norway rat (Rattus norvegicus) IGHC.
Norway rat (Rattus norvegicus) IGHC CH1
| IMGT gene name |
A 1,9-1,1, 1-15 (18,19) |
AB 15.1-15.3 (0,1) |
B 16-26 (11) |
BC 27-36 (8) |
C 39-45 (7) |
CD 45.1-45.7 (3,6) |
D 77-84 (8) |
DE (6,7) |
E 85-96 (10,12) |
EF 96.1-96.2 (0,2) |
F 97-104 (7,8) |
FG 105-117 (9,11) |
G 118-128 (4,5,7) |
Total |
|
| IGHE | +4,-1 | 18 | 11 | 8 | 7 | 3 | 8 | 6 | 10 | 7 | 11 | 5 | 94 | ||
| IGHG1 | +4 | 19 | 11 | 8 | 7 | 3 | 8 | 7 | 12 | 7 | 11 | 4 | 97 | ||
| IGHG2A | +4 | 19 | 11 | 8 | 7 | 3 | 8 | 7 | 12 | 7 | 11 | 4 | 97 | ||
| IGHG2B | +4 | 19 | 11 | 8 | 7 | 3 | 8 | 7 | 10 (1) | 7 | 11 | 4 | 95 | ||
| IGHM | +4 | 19 | 1 | 11 | 8 | 7 | 6 | 8 | 7 | 12 | 2 | 8 | 9 | 7 | 105 |
Norway rat (Rattus norvegicus) IGHC CH2
| IMGT gene name |
A 1,9-1,1, 1-15 (18,20-22) |
AB 15.1-15.3 (1-3) |
B 16-26 (11) |
BC 27-36 (8,10) |
C 39-45 (7) |
CD 45.1-45.7 (4,5) |
D 77-84 (8) |
DE (8,12) |
E 85-96 (12) |
EF 96.1-96.2 (0) |
F 97-104 (8) |
FG 105-117 (9,11) |
G 118-128 (8) |
Total |
|
| IGHE | +7 | 22 | 1 | 11 | 8 | 7 | 5 | 8 | 8 | 12 | 8 | 9 | 8 | 107 | |
| IGHG1 | +3 | 18 | 2 | 11 | 10 | 7 | 4 | 8 | 8 | 12 | 8 | 11 | 8 | 107 | |
| IGHG2A | +3 | 18 | 2 | 11 | 10 | 7 | 4 | 8 | 8 | 12 | 8 | 11 | 8 | 107 | |
| IGHG2B | +6 | 21 | 2 | 11 | 10 | 7 | 4 | 8 | 8 | 12 | 8 | 11 | 8 | 110 | |
| IGHM | +5 | 20 | 3 | 11 | 8 | 7 | 5 | 8 | 12 | 12 | 8 | 9 | 10 | 113 | |
Norway rat (Rattus norvegicus) IGHC CH3
| IMGT gene name |
A 1,9-1,1, 1-15 (19,20) |
AB 15.1-15.3 (0,1) |
B 16-26 (11) |
BC 27-36 (8,9) |
C 39-45 (7) |
CD 45.1-45.7 (4,6) |
D 77-84 (8) |
DE (8,11) |
E 85-96 (12) |
EF 96.1-96.2 (0) |
F 97-104 (8) |
FG 105-117 (11,12) |
G 118-128 (8) |
Total |
|
| IGHA | +4 | 19 | 1 | 11 | 8 | 7 | 6 | 8 | 11 | 12 | 8 | 12 | 8 | 111 | |
| IGHE | +5 | 20 | 1 | 11 | 9 | 7 | 4 | 8 | 8 | 12 | 8 | 11 | 8 | 107 | |
| IGHG1 | +4 | 19 | 11 | 8 | 7 | 4 | 8 | 8 | 12 | 8 | 12 | 8 | 105 | ||
| IGHG2A | +4 | 19 | 11 | 8 | 7 | 4 | 8 | 8 | 12 | 8 | 12 | 8 | 105 | ||
| IGHG2B | +4 | 19 | 11 | 8 | 7 | 4 | 8 | 8 | 12 | 8 | 12 | 8 | 105 | ||
| IGHM | +4 | 19 | 1 | 11 | 9 | 7 | 4 | 8 | 8 | 12 | 8 | 11 | 8 | 106 | |
Norway rat (Rattus norvegicus) IGHC CH4
| IMGT gene name |
A 1,9-1,1, 1-15 (18,20) |
AB 15.1-15.3 (0,1) |
B 16-26 (11) |
BC 27-36 (8) |
C 39-45 (7) |
CD 45.1-45.7 (6) |
D 77-84 (8) |
DE (10) |
E 85-96 (12) |
EF 96.1-96.2 (0) |
F 97-104 (8) |
FG 105-117 (12,13) |
G 118-128 (8) |
Total |
|
| IGHE | +4,-1 | 18 | 11 | 8 | 7 | 6 | 8 | 10 | 12 | 8 | 13 | 8 | 109 | ||
| IGHM | +5 | 20 | 1 | 11 | 8 | 7 | 6 | 8 | 10 | 12 | 8 | 12 | 8 | 111 | |
Click here to see Black rat (Rattus rattus) IGHC CH2
Click here to see Black rat (Rattus rattus) IGHC CH3
Black rat (Rattus rattus) IGHC CH1
Part 1 - Black rat (Rattus rattus) IGHC.
| IMGT gene name |
A 1,9-1,1, 1-15 (19) |
AB 15.1-15.3 (0) |
B 16-26 (11) |
BC 27-36 (8) |
C 39-45 (7) |
CD 45.1-45.7 (3) |
D 77-84 (8) |
DE (7) |
E 85-96 (12) |
EF 96.1-96.2 (0) |
F 97-104 (7) |
FG 105-117 (11) |
G 118-128 (4) |
Total |
|
| IGHG2C | +4 | 19 | 11 | 8 | 7 | 3 | 8 | 7 | 12 | 7 | 11 | 4 | 97 | ||
Black rat (Rattus rattus) IGHC CH2
| IMGT gene name |
A 1,9-1,1, 1-15 (20) |
AB 15.1-15.3 (2) |
B 16-26 (11) |
BC 27-36 (10) |
C 39-45 (7) |
CD 45.1-45.7 (4) |
D 77-84 (8) |
DE (8) |
E 85-96 (12) |
EF 96.1-96.2 (0) |
F 97-104 (8) |
FG 105-117 (11) |
G 118-128 (8) |
Total |
|
| IGHG2C | +5 | 20 | 2 | 11 | 10 | 7 | 4 | 8 | 8 | 12 | 8 | 11 | 8 | 109 | |
Black rat (Rattus rattus) IGHC CH3
| IMGT gene name |
A 1,9-1,1, 1-15 (19) |
AB 15.1-15.3 (0) |
B 16-26 (11) |
BC 27-36 (8) |
C 39-45 (7) |
CD 45.1-45.7 (4) |
D 77-84 (8) |
DE (8) |
E 85-96 (12) |
EF 96.1-96.2 (0) |
F 97-104 (8) |
FG 105-117 (12) |
G 118-128 (8) |
Total |
|
| IGHG2C | +4 | 19 | 11 | 8 | 7 | 4 | 8 | 8 | 12 | 8 | 12 | 8 | 105 | ||
IMGT note:
| (1) | The amino acids 91 and 92 are missing. |
Created: 09/10/2002
Author: Delphine Guiraudou
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
|
IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr |
|
|
|
|
Citing IMGT © Copyright 1995-2012 IMGT®, the international ImMunoGeneTics information system® |
|||
