Only one sequence for each allele is shown. This set of sequences is
part of the IMGT reference directory.
Other known sequences are shown in the individual
Alignments of
alleles
When several alleles are shown, the nucleotide mutations are indicated in red letters.
These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides.
Dots indicate gaps by comparison to the longest sequence.
Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
Direct 5'- 3' orientation Inverted orientation
F I T T V V A V A T T V V I
L L L R * * L * L L P * * *
Y Y Y G S S Y S Y Y R S N K
IGHD-FL16.1 J00434 ,IGHD-FL16.1*01 TTTATTACTACGGTAGTAGCTAC GTAGCTACTACCGTAGTAATAAA
F I T T A V A V V M
S L L R L * P * * *
H Y Y G Y S R S N E
IGHD-FL16.2 J00436 ,IGHD-FL16.2*01 TTCATTACTACGGCTAC GTAGCCGTAGTAATGAA
P T I V T V V T I V
L L * * L * L L * *
Y Y S N Y S Y Y S R
IGHD-SP2.x M60961 ,IGHD-SP2.x*01 CCTACTATAGTAACTAC GTAGTTACTATAGTAGG
S T M V T V V T I V
L L W * L * L P * *
Y Y G N Y S Y H S R
IGHD-SP2.1 M60955 ,IGHD-SP2.1*01 TCTACTATGGTAACTAC GTAGTTACCATAGTAGA
S T M I T V V I I V
L L * L R S * S * *
Y Y D Y D R N H S R
IGHD-SP2.2 J00431 ,IGHD-SP2.2*01 TCTACTATGATTACGAC GTCGTAATCATAGTAGA
S T M V T V V T I V
L L W L R S * P * *
Y Y G Y D R N H S R
IGHD-SP2.3 J00435 ,IGHD-SP2.3*01 TCTACTATGGTTACGAC GTCGTAACCATAGTAGA
S T M V T V V T I V
L L W L R S * P * *
Y Y G Y D R N H S R
IGHD-SP2.4 J00437 ,IGHD-SP2.4*01 TCTACTATGGTTACGAC GTCGTAACCATAGTAGA
S T M V T V V T I V
L L W * L * L P * *
Y Y G N Y S Y H S R
IGHD-SP2.5 J00432 ,IGHD-SP2.5*01 TCTACTATGGTAACTAC GTAGTTACCATAGTAGA
P T M V T V V T I V
L L W L R S * P * *
Y Y G Y D R N H S R
IGHD-SP2.6 J00433 ,IGHD-SP2.6*01 CCTACTATGGTTACGAC GTCGTAACCATAGTAGG
P T M V T V V T I V
L L W * L * L P * *
Y Y G N Y S Y H S R
IGHD-SP2.7 J00438 ,IGHD-SP2.7*01 CCTACTATGGTAACTAC GTAGTTACCATAGTAGG
P S M V T V V T I L
L V W * L * L P Y *
* Y G N Y S Y H T R
IGHD-SP2.8 J00439 ,IGHD-SP2.8*01 CCTAGTATGGTAACTAC GTAGTTACCATACTAGG
S M M V T V V T I I
L * W L L * * P S *
Y D G Y Y S N H H R
IGHD-SP2.9 D13199 ,IGHD-SP2.9*01 TCTATGATGGTTACTAC GTAGTAACCATCATAGA
R Q L G L V A R A V
D S S G Y * P E L S
T A R A S P S C
IGHD-ST4 M23243 ,IGHD-ST4*01 AGACAGCTCGGGCTAC GTAGCCCGAGCTGTCT
L T G V P V
* L G S Q L
N W D P S *
IGHD-Q52(1) L32868 ,IGHD-Q52*01 CTAACTGGGAC GTCCCAGTTAG
IMGT note:
Created: 09/03/2000
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics
information system® http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001);
Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003);
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub],
5, 45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text;
Lefranc, M.-P. et al.,
Nucleic Acids Research 2009 37:
D1006-D1012; doi:10.1093/nar/gkn838
Full text.
(1) For IGHD-Q52*02, the amino acid changes due to the nucleotide T deletion are shown in red.
Author: Géraldine Folch
Contact: Marie-Paule Lefranc
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IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr |
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Citing IMGT © Copyright 1995-2012 IMGT®, the international ImMunoGeneTics information system® |
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