When several alleles are shown, the nucleotide mutations and amino acid
changes for a given codon are indicated in red letters. These polymorphic mutations are reported in
Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the
IMGT unique numbering.
Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
For the TRAV11 subgroup, sequences of the TRAV11D gene cannot be differentiated from those of the TRAV11 gene, when these sequences are not
mapped. These unmapped sequences are therefore described
as "TRAV11 alleles" and compared to the allele *01 of TRAV11 (AC005240). However it is not excluded
that some of these "alleles" belong exclusively to the TRAV11D gene.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
K T Q V E Q S P Q S L V V R Q G E N C V
AC005240,TRAV11*01 AAG ACC CAA GTG GAG CAG AGT CCT CAG TCC CTG GTT GTC CGT CAG GGA GAG AAC TGC GTC
AC004101,TRAV11D*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
AY158220,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
D90230 ,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
AY158218,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
D90229 ,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
AY158219,TRAV11*03P --- --- --- --- --- --- --- --- --- --- --- --- --- --C --- --- --- --- --- ---
_________________CDR1-IMGT______________________
21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40
L Q C N Y S V T P D N H L R
AC005240,TRAV11*01 CTT CAA TGT AAT TAC AGT GTG ACC CCC GAC AAC CAC ... ... ... ... ... ... TTA AGG
AC004101,TRAV11D*01 --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---
AY158220,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---
D90230 ,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---
AY158218,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---
D90229 ,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---
*
AY158219,TRAV11*03P --- --- --- --- --G --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---
_____________CDR2-IM
41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
W F K Q D T G K G L V S L T V L V H E N
AC005240,TRAV11*01 TGG TTC AAA CAG GAC ACA GGC AAA GGT CTT GTG TCC CTG ACA GTC CTG GTT CAT GAA AAT
AC004101,TRAV11D*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
AY158220,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
D90230 ,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
D Q K
AY158218,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-C C-- --A
D Q K
D90229 ,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-C C-- --A
Q K
AY158219,TRAV11*03P --- --- --- --- --- --- --- --- --- --- --- --A --- --- --- --- --- --C C-- --A
GT__________________
61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80
D K T S N G R Y S
AC005240,TRAV11*01 GAC ... ... ... ... AAA ACG TCA AAT GGG ... ... ... ... ... ... ... AGA TAC TCA
AC004101,TRAV11D*01 --- ... ... ... ... --- --- --- --- --- ... ... ... ... ... ... ... --- --- ---
AY158220,TRAV11*01 --- ... ... ... ... --- --- --- --- --- ... ... ... ... ... ... ... --- --- ---
D90230 ,TRAV11*01 --- ... ... ... ... --- --- --- --- --- ... ... ... ... ... ... ... --- --- ---
AY158218,TRAV11*02 --- ... ... ... ... --- --- --- --- --- ... ... ... ... ... ... ... --- --- ---
D90229 ,TRAV11*02 --- ... ... ... ... --- --- --- --- --- ... ... ... ... ... ... ... --- --- ---
AY158219,TRAV11*03P --- ... ... ... ... --- --- --- --C --- ... ... ... ... ... ... ... --- --- ---
81 82 83 84 84A 84B 84C 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
A T L D K D A K H S T L H I T A T L L D D T A
AC005240,TRAV11*01 GCA ACT CTG GAT AAA GAT GCT AAG CAC AGC ACG CTG CAC ATC ACA GCC ACC CTG CTG GAT GAC ACT GCC
AC004101,TRAV11D*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
AY158220,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
D90230 ,TRAV11*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
AY158218,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
D90229 ,TRAV11*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
R
AY158219,TRAV11*03P --- --- --- --- -G- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
__CDR3-IMGT__
101 102 103 104 105 106 107
T Y I C V V G
AC005240,TRAV11*01 ACC TAC ATC TGT GTG GTG GGC G
AC004101,TRAV11D*01 --- --- --- --- --- --- --- -
AY158220,TRAV11*01 --- --- --- --- --- --- --- -
D90230 ,TRAV11*01 --- --- --- --- --- -
AY158218,TRAV11*02 --- --- --- --- --- --- --- -
D90229 ,TRAV11*02 --- --- --- --- --- -
AY158219,TRAV11*03P --- --- --- --- --- --- --- -
* STOP_CODON mutation
Created: 01/02/2001
Last updated: Monday, 11-Jul-2011 12:56:51 CEST
Author: Nathalie Bosc
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
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