Protein display: Bull shark (Carcharhinus leucas) IGH V-REGIONs

Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.

Letters in red correspond to amino acids which are polymorphic in the other alleles.
For C-REGIONs, letters in bold correspond to additional positions in the IMGT unique numbering.
For C-REGIONs, letters between parentheses correspond to amino acids resulting from the splicing.

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

__________________________________________________________________________________________________________________________________________________

      IGHV                        FR1-IMGT             CDR1-IMGT       FR2-IMGT       CDR2-IMGT                  FR3-IMGT                 CDR3-IMGT
      gene                         (1-26)               (27-38)        (39-55)         (56-65)                   (66-104)                 (105-115)
________________________   __________________________ ____________ _________________ __________ _______________________________________ ___________  
                           1       10        20         30         40        50         60         70        80        90        100       110

                           .........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|.........|.........|.... .....|.....    

#c U50611  ,IGHV1S1        DIVLTQPES.VVKKPGETVRLSCAVS GSDTSTYG.... VIWVKQVPWQRMEWLLH YYSSNNK... KFAPGIE.GRFTPSQ..ERNTAYLVITNLNADDTAIYYC VR
#c U50612  ,IGHV1S2        DIVLTQPES.VVKKPGETVRLSCAVS GFDMNSYG.... VTGVKQVPGKGLSWLLY YRSSSSR... DFAPGIE.GRFTPSA..VSNTASIEITSLSRDDTAIYYC AR
#c U50613  ,IGHV1S3        DIVLTQPES.VVKKPGETVRLSCAVS GFDISTYA.... VTWVKQVPGNGLEWLLY YRRERDK... GVAPGIK.GRFTPSA..FSSTAYIEITSLRADDTAIYYC AR
#c U50614  ,IGHV1S4        DIVLTQPES.VVKKPGETVRISCVVK GFDISNYG.... INWVKQVPGKGLEWLLY VRSPNVK... AFALELK.ARFTASV..VSNIASIEITSLITLTPALYYC AR 


#c: rearranged cDNA


Created: Monday, 11-Jul-2011 12:57:02 CEST
Authors: Lorena Betancourt and Dominique Scaviner
Contact: Marie-Paule Lefranc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.


IMGT founder and director: Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr
Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr
Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr
     

Citing IMGT
Warranty disclaimer and copyright notice
Privacy policy and advertisement policy

© Copyright 1995-2012 IMGT®, the international ImMunoGeneTics information system®